Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col12a1Q60847 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col12a1Q60847 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col12a1Q60847 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col12a1Q60847 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Col12a1Q60847 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col12a1Q60847 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col12a1Q60847 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Col12a1Q60847 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Col12a1Q60847 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Col12a1Q60847 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col12a1Q60847 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col12a1Q60847 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col12a1Q60847 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col12a1Q60847 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.22■□□□□ 0.83
Col12a1Q60847 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col12a1Q60847 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col12a1Q60847 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col12a1Q60847 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col12a1Q60847 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col12a1Q60847 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Col12a1Q60847 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col12a1Q60847 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col12a1Q60847 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Col12a1Q60847 Gm13836-201ENSMUST00000121159 501 ntBASIC20.2■□□□□ 0.82
Col12a1Q60847 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col12a1Q60847 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.2■□□□□ 0.82
Col12a1Q60847 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col12a1Q60847 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col12a1Q60847 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Col12a1Q60847 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.2■□□□□ 0.82
Col12a1Q60847 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.2■□□□□ 0.82
Col12a1Q60847 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col12a1Q60847 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.19■□□□□ 0.82
Col12a1Q60847 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.19■□□□□ 0.82
Col12a1Q60847 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col12a1Q60847 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.19■□□□□ 0.82
Col12a1Q60847 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col12a1Q60847 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col12a1Q60847 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.19■□□□□ 0.82
Col12a1Q60847 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col12a1Q60847 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Col12a1Q60847 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col12a1Q60847 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col12a1Q60847 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.18■□□□□ 0.82
Col12a1Q60847 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.18■□□□□ 0.82
Col12a1Q60847 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col12a1Q60847 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.18■□□□□ 0.82
Col12a1Q60847 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col12a1Q60847 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col12a1Q60847 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col12a1Q60847 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col12a1Q60847 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col12a1Q60847 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col12a1Q60847 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col12a1Q60847 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Col12a1Q60847 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col12a1Q60847 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col12a1Q60847 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col12a1Q60847 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col12a1Q60847 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Col12a1Q60847 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col12a1Q60847 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col12a1Q60847 Gm5408-201ENSMUST00000197998 747 ntBASIC20.16■□□□□ 0.82
Col12a1Q60847 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.16■□□□□ 0.82
Col12a1Q60847 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col12a1Q60847 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col12a1Q60847 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col12a1Q60847 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col12a1Q60847 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Col12a1Q60847 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Col12a1Q60847 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col12a1Q60847 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col12a1Q60847 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col12a1Q60847 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Col12a1Q60847 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col12a1Q60847 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.14■□□□□ 0.82
Col12a1Q60847 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Col12a1Q60847 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Col12a1Q60847 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col12a1Q60847 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.14■□□□□ 0.81
Col12a1Q60847 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col12a1Q60847 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.14■□□□□ 0.81
Col12a1Q60847 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col12a1Q60847 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col12a1Q60847 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col12a1Q60847 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Col12a1Q60847 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col12a1Q60847 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Col12a1Q60847 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col12a1Q60847 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col12a1Q60847 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col12a1Q60847 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col12a1Q60847 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col12a1Q60847 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col12a1Q60847 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.12■□□□□ 0.81
Col12a1Q60847 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.12■□□□□ 0.81
Col12a1Q60847 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col12a1Q60847 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col12a1Q60847 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms