Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav6-2Q5R1I4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-2Q5R1I4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-2Q5R1I4 Gm26571-201ENSMUST00000181399 666 ntBASIC17.67■□□□□ 0.42
Trav6-2Q5R1I4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav6-2Q5R1I4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.67■□□□□ 0.42
Trav6-2Q5R1I4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trav6-2Q5R1I4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav6-2Q5R1I4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-2Q5R1I4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-2Q5R1I4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav6-2Q5R1I4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-2Q5R1I4 Gm42778-201ENSMUST00000199644 553 ntBASIC17.66■□□□□ 0.42
Trav6-2Q5R1I4 Gm18671-201ENSMUST00000214826 683 ntBASIC17.66■□□□□ 0.42
Trav6-2Q5R1I4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-2Q5R1I4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-2Q5R1I4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Trav6-2Q5R1I4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-2Q5R1I4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-2Q5R1I4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-2Q5R1I4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-2Q5R1I4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav6-2Q5R1I4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-2Q5R1I4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.65■□□□□ 0.42
Trav6-2Q5R1I4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav6-2Q5R1I4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.65■□□□□ 0.42
Trav6-2Q5R1I4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-2Q5R1I4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav6-2Q5R1I4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Trav6-2Q5R1I4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.65■□□□□ 0.42
Trav6-2Q5R1I4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-2Q5R1I4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.64■□□□□ 0.42
Trav6-2Q5R1I4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-2Q5R1I4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-2Q5R1I4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-2Q5R1I4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.64■□□□□ 0.41
Trav6-2Q5R1I4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-2Q5R1I4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trav6-2Q5R1I4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-2Q5R1I4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-2Q5R1I4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trav6-2Q5R1I4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-2Q5R1I4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-2Q5R1I4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-2Q5R1I4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-2Q5R1I4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-2Q5R1I4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-2Q5R1I4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-2Q5R1I4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav6-2Q5R1I4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.63■□□□□ 0.41
Trav6-2Q5R1I4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-2Q5R1I4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-2Q5R1I4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-2Q5R1I4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-2Q5R1I4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-2Q5R1I4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.63■□□□□ 0.41
Trav6-2Q5R1I4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-2Q5R1I4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6-2Q5R1I4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6-2Q5R1I4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.62■□□□□ 0.41
Trav6-2Q5R1I4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6-2Q5R1I4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-2Q5R1I4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-2Q5R1I4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-2Q5R1I4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-2Q5R1I4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trav6-2Q5R1I4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-2Q5R1I4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav6-2Q5R1I4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.61■□□□□ 0.41
Trav6-2Q5R1I4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-2Q5R1I4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-2Q5R1I4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-2Q5R1I4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-2Q5R1I4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav6-2Q5R1I4 Gm10849-201ENSMUST00000100397 618 ntBASIC17.6■□□□□ 0.41
Trav6-2Q5R1I4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.6■□□□□ 0.41
Trav6-2Q5R1I4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.6■□□□□ 0.41
Trav6-2Q5R1I4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-2Q5R1I4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Trav6-2Q5R1I4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trav6-2Q5R1I4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-2Q5R1I4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-2Q5R1I4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-2Q5R1I4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-2Q5R1I4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-2Q5R1I4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-2Q5R1I4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-2Q5R1I4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-2Q5R1I4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav6-2Q5R1I4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-2Q5R1I4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav6-2Q5R1I4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-2Q5R1I4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav6-2Q5R1I4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav6-2Q5R1I4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Trav6-2Q5R1I4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Trav6-2Q5R1I4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.58■□□□□ 0.4
Trav6-2Q5R1I4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6-2Q5R1I4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6-2Q5R1I4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms