Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf43Q5NCP0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.46■□□□□ 0.87
Rnf43Q5NCP0 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.46■□□□□ 0.87
Rnf43Q5NCP0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf43Q5NCP0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf43Q5NCP0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf43Q5NCP0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf43Q5NCP0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rnf43Q5NCP0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Rnf43Q5NCP0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf43Q5NCP0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
Rnf43Q5NCP0 Gm11421-201ENSMUST00000122124 294 ntBASIC20.45■□□□□ 0.86
Rnf43Q5NCP0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf43Q5NCP0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf43Q5NCP0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf43Q5NCP0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rnf43Q5NCP0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf43Q5NCP0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rnf43Q5NCP0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf43Q5NCP0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.45■□□□□ 0.86
Rnf43Q5NCP0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.44■□□□□ 0.86
Rnf43Q5NCP0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf43Q5NCP0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf43Q5NCP0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf43Q5NCP0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf43Q5NCP0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf43Q5NCP0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf43Q5NCP0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf43Q5NCP0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf43Q5NCP0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Rnf43Q5NCP0 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.43■□□□□ 0.86
Rnf43Q5NCP0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf43Q5NCP0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf43Q5NCP0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.43■□□□□ 0.86
Rnf43Q5NCP0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf43Q5NCP0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf43Q5NCP0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf43Q5NCP0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf43Q5NCP0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.43■□□□□ 0.86
Rnf43Q5NCP0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf43Q5NCP0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf43Q5NCP0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rnf43Q5NCP0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf43Q5NCP0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf43Q5NCP0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.43■□□□□ 0.86
Rnf43Q5NCP0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf43Q5NCP0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rnf43Q5NCP0 Gm27011-201ENSMUST00000182352 972 ntBASIC20.42■□□□□ 0.86
Rnf43Q5NCP0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf43Q5NCP0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Rnf43Q5NCP0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf43Q5NCP0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf43Q5NCP0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf43Q5NCP0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf43Q5NCP0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf43Q5NCP0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf43Q5NCP0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf43Q5NCP0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.41■□□□□ 0.86
Rnf43Q5NCP0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf43Q5NCP0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Rnf43Q5NCP0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.4■□□□□ 0.86
Rnf43Q5NCP0 Gm42778-201ENSMUST00000199644 553 ntBASIC20.4■□□□□ 0.86
Rnf43Q5NCP0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf43Q5NCP0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf43Q5NCP0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rnf43Q5NCP0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Rnf43Q5NCP0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf43Q5NCP0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf43Q5NCP0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.39■□□□□ 0.85
Rnf43Q5NCP0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.39■□□□□ 0.85
Rnf43Q5NCP0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf43Q5NCP0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf43Q5NCP0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf43Q5NCP0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf43Q5NCP0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf43Q5NCP0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Rnf43Q5NCP0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf43Q5NCP0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf43Q5NCP0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf43Q5NCP0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Rnf43Q5NCP0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.38■□□□□ 0.85
Rnf43Q5NCP0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
Rnf43Q5NCP0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf43Q5NCP0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf43Q5NCP0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rnf43Q5NCP0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rnf43Q5NCP0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf43Q5NCP0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf43Q5NCP0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf43Q5NCP0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf43Q5NCP0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf43Q5NCP0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.37■□□□□ 0.85
Rnf43Q5NCP0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf43Q5NCP0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf43Q5NCP0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf43Q5NCP0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf43Q5NCP0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf43Q5NCP0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.36■□□□□ 0.85
Rnf43Q5NCP0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.36■□□□□ 0.85
Rnf43Q5NCP0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms