Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.25■□□□□ 0.83
Vps13aQ5H8C4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Vps13aQ5H8C4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.25■□□□□ 0.83
Vps13aQ5H8C4 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.25■□□□□ 0.83
Vps13aQ5H8C4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.25■□□□□ 0.83
Vps13aQ5H8C4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vps13aQ5H8C4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.24■□□□□ 0.83
Vps13aQ5H8C4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.24■□□□□ 0.83
Vps13aQ5H8C4 Gm10812-201ENSMUST00000099864 546 ntBASIC20.24■□□□□ 0.83
Vps13aQ5H8C4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps13aQ5H8C4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Vps13aQ5H8C4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps13aQ5H8C4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vps13aQ5H8C4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vps13aQ5H8C4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps13aQ5H8C4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps13aQ5H8C4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps13aQ5H8C4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps13aQ5H8C4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps13aQ5H8C4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps13aQ5H8C4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vps13aQ5H8C4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps13aQ5H8C4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps13aQ5H8C4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps13aQ5H8C4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vps13aQ5H8C4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps13aQ5H8C4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps13aQ5H8C4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps13aQ5H8C4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Vps13aQ5H8C4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.23■□□□□ 0.83
Vps13aQ5H8C4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.22■□□□□ 0.83
Vps13aQ5H8C4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Vps13aQ5H8C4 Gm9988-201ENSMUST00000069786 435 ntBASIC20.22■□□□□ 0.83
Vps13aQ5H8C4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps13aQ5H8C4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vps13aQ5H8C4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps13aQ5H8C4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.22■□□□□ 0.83
Vps13aQ5H8C4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.22■□□□□ 0.83
Vps13aQ5H8C4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps13aQ5H8C4 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.22■□□□□ 0.83
Vps13aQ5H8C4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vps13aQ5H8C4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps13aQ5H8C4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps13aQ5H8C4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vps13aQ5H8C4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.21■□□□□ 0.83
Vps13aQ5H8C4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.21■□□□□ 0.83
Vps13aQ5H8C4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps13aQ5H8C4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps13aQ5H8C4 Gm13836-201ENSMUST00000121159 501 ntBASIC20.21■□□□□ 0.83
Vps13aQ5H8C4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Vps13aQ5H8C4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Vps13aQ5H8C4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vps13aQ5H8C4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps13aQ5H8C4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vps13aQ5H8C4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps13aQ5H8C4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.2■□□□□ 0.82
Vps13aQ5H8C4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps13aQ5H8C4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps13aQ5H8C4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps13aQ5H8C4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Vps13aQ5H8C4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Vps13aQ5H8C4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.19■□□□□ 0.82
Vps13aQ5H8C4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps13aQ5H8C4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps13aQ5H8C4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Vps13aQ5H8C4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.19■□□□□ 0.82
Vps13aQ5H8C4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps13aQ5H8C4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.18■□□□□ 0.82
Vps13aQ5H8C4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps13aQ5H8C4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps13aQ5H8C4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps13aQ5H8C4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Vps13aQ5H8C4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps13aQ5H8C4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.18■□□□□ 0.82
Vps13aQ5H8C4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps13aQ5H8C4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Vps13aQ5H8C4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.18■□□□□ 0.82
Vps13aQ5H8C4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps13aQ5H8C4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps13aQ5H8C4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vps13aQ5H8C4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps13aQ5H8C4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vps13aQ5H8C4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vps13aQ5H8C4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Vps13aQ5H8C4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Vps13aQ5H8C4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Vps13aQ5H8C4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Vps13aQ5H8C4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps13aQ5H8C4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Vps13aQ5H8C4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.16■□□□□ 0.82
Vps13aQ5H8C4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps13aQ5H8C4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps13aQ5H8C4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vps13aQ5H8C4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Vps13aQ5H8C4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.15■□□□□ 0.82
Vps13aQ5H8C4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps13aQ5H8C4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vps13aQ5H8C4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps13aQ5H8C4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Vps13aQ5H8C4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms