Protein–RNA interactions for Protein: Q4ZGD9

Nxf3, Nuclear RNA export factor 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nxf3Q4ZGD9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Nxf3Q4ZGD9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nxf3Q4ZGD9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nxf3Q4ZGD9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nxf3Q4ZGD9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nxf3Q4ZGD9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nxf3Q4ZGD9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.77■□□□□ 0.6
Nxf3Q4ZGD9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nxf3Q4ZGD9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nxf3Q4ZGD9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nxf3Q4ZGD9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.77■□□□□ 0.6
Nxf3Q4ZGD9 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.77■□□□□ 0.6
Nxf3Q4ZGD9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nxf3Q4ZGD9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nxf3Q4ZGD9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nxf3Q4ZGD9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nxf3Q4ZGD9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nxf3Q4ZGD9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nxf3Q4ZGD9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nxf3Q4ZGD9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Nxf3Q4ZGD9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nxf3Q4ZGD9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nxf3Q4ZGD9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nxf3Q4ZGD9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.75■□□□□ 0.59
Nxf3Q4ZGD9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Nxf3Q4ZGD9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.75■□□□□ 0.59
Nxf3Q4ZGD9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nxf3Q4ZGD9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nxf3Q4ZGD9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.75■□□□□ 0.59
Nxf3Q4ZGD9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nxf3Q4ZGD9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nxf3Q4ZGD9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nxf3Q4ZGD9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nxf3Q4ZGD9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nxf3Q4ZGD9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nxf3Q4ZGD9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nxf3Q4ZGD9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nxf3Q4ZGD9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.74■□□□□ 0.59
Nxf3Q4ZGD9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nxf3Q4ZGD9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nxf3Q4ZGD9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nxf3Q4ZGD9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nxf3Q4ZGD9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nxf3Q4ZGD9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.73■□□□□ 0.59
Nxf3Q4ZGD9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.73■□□□□ 0.59
Nxf3Q4ZGD9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.73■□□□□ 0.59
Nxf3Q4ZGD9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nxf3Q4ZGD9 Gm5921-201ENSMUST00000075898 882 ntBASIC18.73■□□□□ 0.59
Nxf3Q4ZGD9 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.73■□□□□ 0.59
Nxf3Q4ZGD9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.73■□□□□ 0.59
Nxf3Q4ZGD9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Nxf3Q4ZGD9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nxf3Q4ZGD9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nxf3Q4ZGD9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nxf3Q4ZGD9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nxf3Q4ZGD9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nxf3Q4ZGD9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nxf3Q4ZGD9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nxf3Q4ZGD9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nxf3Q4ZGD9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nxf3Q4ZGD9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nxf3Q4ZGD9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Nxf3Q4ZGD9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Nxf3Q4ZGD9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
Nxf3Q4ZGD9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nxf3Q4ZGD9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nxf3Q4ZGD9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nxf3Q4ZGD9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nxf3Q4ZGD9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nxf3Q4ZGD9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nxf3Q4ZGD9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Nxf3Q4ZGD9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nxf3Q4ZGD9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nxf3Q4ZGD9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nxf3Q4ZGD9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nxf3Q4ZGD9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nxf3Q4ZGD9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nxf3Q4ZGD9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nxf3Q4ZGD9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.69■□□□□ 0.58
Nxf3Q4ZGD9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.69■□□□□ 0.58
Nxf3Q4ZGD9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nxf3Q4ZGD9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nxf3Q4ZGD9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nxf3Q4ZGD9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nxf3Q4ZGD9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nxf3Q4ZGD9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nxf3Q4ZGD9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nxf3Q4ZGD9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nxf3Q4ZGD9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.68■□□□□ 0.58
Nxf3Q4ZGD9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.68■□□□□ 0.58
Nxf3Q4ZGD9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.68■□□□□ 0.58
Nxf3Q4ZGD9 Gm10232-201ENSMUST00000089221 720 ntBASIC18.68■□□□□ 0.58
Nxf3Q4ZGD9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.68■□□□□ 0.58
Nxf3Q4ZGD9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nxf3Q4ZGD9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nxf3Q4ZGD9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nxf3Q4ZGD9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nxf3Q4ZGD9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nxf3Q4ZGD9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nxf3Q4ZGD9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms