Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
Pds5bQ4VA53 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC35.89■■■■□ 3.34
Pds5bQ4VA53 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
Pds5bQ4VA53 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
Pds5bQ4VA53 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC35.88■■■■□ 3.33
Pds5bQ4VA53 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC35.88■■■■□ 3.33
Pds5bQ4VA53 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
Pds5bQ4VA53 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC35.87■■■■□ 3.33
Pds5bQ4VA53 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
Pds5bQ4VA53 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC35.86■■■■□ 3.33
Pds5bQ4VA53 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Pds5bQ4VA53 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Pds5bQ4VA53 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC35.86■■■■□ 3.33
Pds5bQ4VA53 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
Pds5bQ4VA53 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
Pds5bQ4VA53 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC35.85■■■■□ 3.33
Pds5bQ4VA53 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
Pds5bQ4VA53 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC35.84■■■■□ 3.33
Pds5bQ4VA53 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Pds5bQ4VA53 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC35.84■■■■□ 3.33
Pds5bQ4VA53 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Pds5bQ4VA53 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC35.83■■■■□ 3.33
Pds5bQ4VA53 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC35.83■■■■□ 3.33
Pds5bQ4VA53 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC35.83■■■■□ 3.33
Pds5bQ4VA53 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Pds5bQ4VA53 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC35.83■■■■□ 3.33
Pds5bQ4VA53 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
Pds5bQ4VA53 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC35.83■■■■□ 3.33
Pds5bQ4VA53 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Pds5bQ4VA53 Gm6365-201ENSMUST00000054711 744 ntBASIC35.83■■■■□ 3.33
Pds5bQ4VA53 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.33
Pds5bQ4VA53 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC35.82■■■■□ 3.33
Pds5bQ4VA53 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.33
Pds5bQ4VA53 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC35.82■■■■□ 3.33
Pds5bQ4VA53 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
Pds5bQ4VA53 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC35.82■■■■□ 3.32
Pds5bQ4VA53 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
Pds5bQ4VA53 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC35.81■■■■□ 3.32
Pds5bQ4VA53 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC35.81■■■■□ 3.32
Pds5bQ4VA53 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC35.81■■■■□ 3.32
Pds5bQ4VA53 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Pds5bQ4VA53 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Pds5bQ4VA53 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Pds5bQ4VA53 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC35.8■■■■□ 3.32
Pds5bQ4VA53 Gm10571-201ENSMUST00000097869 1638 ntBASIC35.8■■■■□ 3.32
Pds5bQ4VA53 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Pds5bQ4VA53 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC35.79■■■■□ 3.32
Pds5bQ4VA53 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC35.79■■■■□ 3.32
Pds5bQ4VA53 CT010467.1-202ENSMUST00000205406 714 ntBASIC35.79■■■■□ 3.32
Pds5bQ4VA53 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC35.79■■■■□ 3.32
Pds5bQ4VA53 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Pds5bQ4VA53 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC35.79■■■■□ 3.32
Pds5bQ4VA53 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Pds5bQ4VA53 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC35.78■■■■□ 3.32
Pds5bQ4VA53 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Pds5bQ4VA53 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC35.78■■■■□ 3.32
Pds5bQ4VA53 Gm26524-201ENSMUST00000192339 390 ntBASIC35.78■■■■□ 3.32
Pds5bQ4VA53 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Pds5bQ4VA53 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC35.78■■■■□ 3.32
Pds5bQ4VA53 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC35.78■■■■□ 3.32
Pds5bQ4VA53 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Pds5bQ4VA53 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Pds5bQ4VA53 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
Pds5bQ4VA53 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
Pds5bQ4VA53 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Pds5bQ4VA53 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC35.77■■■■□ 3.32
Pds5bQ4VA53 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC35.77■■■■□ 3.32
Pds5bQ4VA53 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
Pds5bQ4VA53 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC35.76■■■■□ 3.32
Pds5bQ4VA53 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC35.76■■■■□ 3.32
Pds5bQ4VA53 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
Pds5bQ4VA53 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
Pds5bQ4VA53 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Pds5bQ4VA53 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
Pds5bQ4VA53 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Pds5bQ4VA53 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Pds5bQ4VA53 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC35.75■■■■□ 3.31
Pds5bQ4VA53 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Pds5bQ4VA53 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Pds5bQ4VA53 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
Pds5bQ4VA53 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
Pds5bQ4VA53 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Pds5bQ4VA53 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC35.74■■■■□ 3.31
Pds5bQ4VA53 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Pds5bQ4VA53 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC35.74■■■■□ 3.31
Pds5bQ4VA53 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC35.74■■■■□ 3.31
Pds5bQ4VA53 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
Pds5bQ4VA53 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC35.74■■■■□ 3.31
Pds5bQ4VA53 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC35.74■■■■□ 3.31
Pds5bQ4VA53 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
Pds5bQ4VA53 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Pds5bQ4VA53 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Pds5bQ4VA53 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC35.73■■■■□ 3.31
Pds5bQ4VA53 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
Pds5bQ4VA53 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC35.73■■■■□ 3.31
Pds5bQ4VA53 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
Pds5bQ4VA53 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC35.72■■■■□ 3.31
Pds5bQ4VA53 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC35.72■■■■□ 3.31
Pds5bQ4VA53 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC35.72■■■■□ 3.31
Pds5bQ4VA53 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms