Protein–RNA interactions for Protein: Q4QQM4

Trp53i11, Tumor protein p53-inducible protein 11, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53i11Q4QQM4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trp53i11Q4QQM4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trp53i11Q4QQM4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trp53i11Q4QQM4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.01■□□□□ 0.63
Trp53i11Q4QQM4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trp53i11Q4QQM4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trp53i11Q4QQM4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trp53i11Q4QQM4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trp53i11Q4QQM4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trp53i11Q4QQM4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trp53i11Q4QQM4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trp53i11Q4QQM4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trp53i11Q4QQM4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trp53i11Q4QQM4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trp53i11Q4QQM4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trp53i11Q4QQM4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trp53i11Q4QQM4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trp53i11Q4QQM4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trp53i11Q4QQM4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trp53i11Q4QQM4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trp53i11Q4QQM4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trp53i11Q4QQM4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.99■□□□□ 0.63
Trp53i11Q4QQM4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trp53i11Q4QQM4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Trp53i11Q4QQM4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.99■□□□□ 0.63
Trp53i11Q4QQM4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trp53i11Q4QQM4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trp53i11Q4QQM4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.99■□□□□ 0.63
Trp53i11Q4QQM4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trp53i11Q4QQM4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trp53i11Q4QQM4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trp53i11Q4QQM4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trp53i11Q4QQM4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trp53i11Q4QQM4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.98■□□□□ 0.63
Trp53i11Q4QQM4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trp53i11Q4QQM4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trp53i11Q4QQM4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trp53i11Q4QQM4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trp53i11Q4QQM4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trp53i11Q4QQM4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trp53i11Q4QQM4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trp53i11Q4QQM4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trp53i11Q4QQM4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trp53i11Q4QQM4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trp53i11Q4QQM4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trp53i11Q4QQM4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trp53i11Q4QQM4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trp53i11Q4QQM4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trp53i11Q4QQM4 Gm21956-201ENSMUST00000179946 522 ntBASIC18.96■□□□□ 0.63
Trp53i11Q4QQM4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.96■□□□□ 0.63
Trp53i11Q4QQM4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.96■□□□□ 0.63
Trp53i11Q4QQM4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trp53i11Q4QQM4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trp53i11Q4QQM4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trp53i11Q4QQM4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trp53i11Q4QQM4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trp53i11Q4QQM4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.95■□□□□ 0.62
Trp53i11Q4QQM4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trp53i11Q4QQM4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trp53i11Q4QQM4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trp53i11Q4QQM4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trp53i11Q4QQM4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trp53i11Q4QQM4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trp53i11Q4QQM4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trp53i11Q4QQM4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trp53i11Q4QQM4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.94■□□□□ 0.62
Trp53i11Q4QQM4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trp53i11Q4QQM4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trp53i11Q4QQM4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trp53i11Q4QQM4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trp53i11Q4QQM4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trp53i11Q4QQM4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trp53i11Q4QQM4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.93■□□□□ 0.62
Trp53i11Q4QQM4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Trp53i11Q4QQM4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trp53i11Q4QQM4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trp53i11Q4QQM4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trp53i11Q4QQM4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trp53i11Q4QQM4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.93■□□□□ 0.62
Trp53i11Q4QQM4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.93■□□□□ 0.62
Trp53i11Q4QQM4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trp53i11Q4QQM4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trp53i11Q4QQM4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trp53i11Q4QQM4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trp53i11Q4QQM4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trp53i11Q4QQM4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trp53i11Q4QQM4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trp53i11Q4QQM4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trp53i11Q4QQM4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.92■□□□□ 0.62
Trp53i11Q4QQM4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trp53i11Q4QQM4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trp53i11Q4QQM4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trp53i11Q4QQM4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trp53i11Q4QQM4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trp53i11Q4QQM4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trp53i11Q4QQM4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trp53i11Q4QQM4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trp53i11Q4QQM4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trp53i11Q4QQM4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trp53i11Q4QQM4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms