Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smu1Q3UKJ7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smu1Q3UKJ7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Smu1Q3UKJ7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Smu1Q3UKJ7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.19■□□□□ 0.66
Smu1Q3UKJ7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smu1Q3UKJ7 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.19■□□□□ 0.66
Smu1Q3UKJ7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smu1Q3UKJ7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Smu1Q3UKJ7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smu1Q3UKJ7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smu1Q3UKJ7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smu1Q3UKJ7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smu1Q3UKJ7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smu1Q3UKJ7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smu1Q3UKJ7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smu1Q3UKJ7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.18■□□□□ 0.66
Smu1Q3UKJ7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Smu1Q3UKJ7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Smu1Q3UKJ7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smu1Q3UKJ7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smu1Q3UKJ7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.18■□□□□ 0.66
Smu1Q3UKJ7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smu1Q3UKJ7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smu1Q3UKJ7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smu1Q3UKJ7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smu1Q3UKJ7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smu1Q3UKJ7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smu1Q3UKJ7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smu1Q3UKJ7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smu1Q3UKJ7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.17■□□□□ 0.66
Smu1Q3UKJ7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Smu1Q3UKJ7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.17■□□□□ 0.66
Smu1Q3UKJ7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smu1Q3UKJ7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Smu1Q3UKJ7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smu1Q3UKJ7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smu1Q3UKJ7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smu1Q3UKJ7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Smu1Q3UKJ7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smu1Q3UKJ7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smu1Q3UKJ7 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.16■□□□□ 0.66
Smu1Q3UKJ7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Smu1Q3UKJ7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smu1Q3UKJ7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smu1Q3UKJ7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smu1Q3UKJ7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smu1Q3UKJ7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smu1Q3UKJ7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smu1Q3UKJ7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smu1Q3UKJ7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smu1Q3UKJ7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smu1Q3UKJ7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smu1Q3UKJ7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smu1Q3UKJ7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smu1Q3UKJ7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smu1Q3UKJ7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smu1Q3UKJ7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smu1Q3UKJ7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smu1Q3UKJ7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smu1Q3UKJ7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Smu1Q3UKJ7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smu1Q3UKJ7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smu1Q3UKJ7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smu1Q3UKJ7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smu1Q3UKJ7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smu1Q3UKJ7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smu1Q3UKJ7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.13■□□□□ 0.65
Smu1Q3UKJ7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smu1Q3UKJ7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smu1Q3UKJ7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Smu1Q3UKJ7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smu1Q3UKJ7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Smu1Q3UKJ7 Mir6236-201ENSMUST00000184437 123 ntBASIC19.13■□□□□ 0.65
Smu1Q3UKJ7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smu1Q3UKJ7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.13■□□□□ 0.65
Smu1Q3UKJ7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.13■□□□□ 0.65
Smu1Q3UKJ7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smu1Q3UKJ7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.13■□□□□ 0.65
Smu1Q3UKJ7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smu1Q3UKJ7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smu1Q3UKJ7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smu1Q3UKJ7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smu1Q3UKJ7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smu1Q3UKJ7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smu1Q3UKJ7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smu1Q3UKJ7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.12■□□□□ 0.65
Smu1Q3UKJ7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smu1Q3UKJ7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.12■□□□□ 0.65
Smu1Q3UKJ7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smu1Q3UKJ7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smu1Q3UKJ7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smu1Q3UKJ7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smu1Q3UKJ7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Smu1Q3UKJ7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.11■□□□□ 0.65
Smu1Q3UKJ7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smu1Q3UKJ7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Smu1Q3UKJ7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.11■□□□□ 0.65
Smu1Q3UKJ7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smu1Q3UKJ7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms