Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf44Q3UHJ8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf44Q3UHJ8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf44Q3UHJ8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf44Q3UHJ8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf44Q3UHJ8 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.34■□□□□ 0.69
Rnf44Q3UHJ8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.34■□□□□ 0.69
Rnf44Q3UHJ8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf44Q3UHJ8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.34■□□□□ 0.69
Rnf44Q3UHJ8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf44Q3UHJ8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Rnf44Q3UHJ8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf44Q3UHJ8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf44Q3UHJ8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf44Q3UHJ8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rnf44Q3UHJ8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf44Q3UHJ8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf44Q3UHJ8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rnf44Q3UHJ8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Rnf44Q3UHJ8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf44Q3UHJ8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf44Q3UHJ8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rnf44Q3UHJ8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Rnf44Q3UHJ8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf44Q3UHJ8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf44Q3UHJ8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf44Q3UHJ8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf44Q3UHJ8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rnf44Q3UHJ8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rnf44Q3UHJ8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf44Q3UHJ8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Rnf44Q3UHJ8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
Rnf44Q3UHJ8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.32■□□□□ 0.68
Rnf44Q3UHJ8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf44Q3UHJ8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf44Q3UHJ8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf44Q3UHJ8 Mir6236-201ENSMUST00000184437 123 ntBASIC19.31■□□□□ 0.68
Rnf44Q3UHJ8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf44Q3UHJ8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf44Q3UHJ8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Rnf44Q3UHJ8 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.3■□□□□ 0.68
Rnf44Q3UHJ8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf44Q3UHJ8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf44Q3UHJ8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf44Q3UHJ8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf44Q3UHJ8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.3■□□□□ 0.68
Rnf44Q3UHJ8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf44Q3UHJ8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.3■□□□□ 0.68
Rnf44Q3UHJ8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf44Q3UHJ8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf44Q3UHJ8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf44Q3UHJ8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf44Q3UHJ8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf44Q3UHJ8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.29■□□□□ 0.68
Rnf44Q3UHJ8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Rnf44Q3UHJ8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf44Q3UHJ8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf44Q3UHJ8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf44Q3UHJ8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf44Q3UHJ8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf44Q3UHJ8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.29■□□□□ 0.68
Rnf44Q3UHJ8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.29■□□□□ 0.68
Rnf44Q3UHJ8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf44Q3UHJ8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf44Q3UHJ8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf44Q3UHJ8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf44Q3UHJ8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf44Q3UHJ8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf44Q3UHJ8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf44Q3UHJ8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf44Q3UHJ8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf44Q3UHJ8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf44Q3UHJ8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Rnf44Q3UHJ8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rnf44Q3UHJ8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf44Q3UHJ8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf44Q3UHJ8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf44Q3UHJ8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf44Q3UHJ8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rnf44Q3UHJ8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf44Q3UHJ8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf44Q3UHJ8 Gm12821-201ENSMUST00000120022 600 ntBASIC19.27■□□□□ 0.68
Rnf44Q3UHJ8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.27■□□□□ 0.68
Rnf44Q3UHJ8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.27■□□□□ 0.68
Rnf44Q3UHJ8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf44Q3UHJ8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf44Q3UHJ8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf44Q3UHJ8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rnf44Q3UHJ8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rnf44Q3UHJ8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf44Q3UHJ8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf44Q3UHJ8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf44Q3UHJ8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf44Q3UHJ8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf44Q3UHJ8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
Rnf44Q3UHJ8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.26■□□□□ 0.67
Rnf44Q3UHJ8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rnf44Q3UHJ8 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.26■□□□□ 0.67
Rnf44Q3UHJ8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
Rnf44Q3UHJ8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms