Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Nhej1Q3KNJ2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nhej1Q3KNJ2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.36■■□□□ 1.01
Nhej1Q3KNJ2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nhej1Q3KNJ2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Nhej1Q3KNJ2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nhej1Q3KNJ2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nhej1Q3KNJ2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Nhej1Q3KNJ2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.35■■□□□ 1.01
Nhej1Q3KNJ2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nhej1Q3KNJ2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.35■■□□□ 1.01
Nhej1Q3KNJ2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 Gm10232-201ENSMUST00000089221 720 ntBASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nhej1Q3KNJ2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
Nhej1Q3KNJ2 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.33■■□□□ 1.01
Nhej1Q3KNJ2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.33■■□□□ 1.01
Nhej1Q3KNJ2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nhej1Q3KNJ2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nhej1Q3KNJ2 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.33■■□□□ 1
Nhej1Q3KNJ2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.33■■□□□ 1
Nhej1Q3KNJ2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Nhej1Q3KNJ2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nhej1Q3KNJ2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nhej1Q3KNJ2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nhej1Q3KNJ2 Gm7143-201ENSMUST00000222811 859 ntBASIC21.32■■□□□ 1
Nhej1Q3KNJ2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Nhej1Q3KNJ2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nhej1Q3KNJ2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nhej1Q3KNJ2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nhej1Q3KNJ2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Nhej1Q3KNJ2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nhej1Q3KNJ2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Nhej1Q3KNJ2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nhej1Q3KNJ2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nhej1Q3KNJ2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Nhej1Q3KNJ2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nhej1Q3KNJ2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Nhej1Q3KNJ2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nhej1Q3KNJ2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nhej1Q3KNJ2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nhej1Q3KNJ2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nhej1Q3KNJ2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nhej1Q3KNJ2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nhej1Q3KNJ2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.29■■□□□ 1
Nhej1Q3KNJ2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nhej1Q3KNJ2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nhej1Q3KNJ2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nhej1Q3KNJ2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nhej1Q3KNJ2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nhej1Q3KNJ2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.28■■□□□ 1
Nhej1Q3KNJ2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.28■■□□□ 1
Nhej1Q3KNJ2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nhej1Q3KNJ2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Nhej1Q3KNJ2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.28■■□□□ 1
Nhej1Q3KNJ2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nhej1Q3KNJ2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nhej1Q3KNJ2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Nhej1Q3KNJ2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Nhej1Q3KNJ2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nhej1Q3KNJ2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Nhej1Q3KNJ2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Nhej1Q3KNJ2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Nhej1Q3KNJ2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nhej1Q3KNJ2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nhej1Q3KNJ2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nhej1Q3KNJ2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.27■□□□□ 0.99
Nhej1Q3KNJ2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nhej1Q3KNJ2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Nhej1Q3KNJ2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nhej1Q3KNJ2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.26■□□□□ 0.99
Nhej1Q3KNJ2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nhej1Q3KNJ2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nhej1Q3KNJ2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nhej1Q3KNJ2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Nhej1Q3KNJ2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Nhej1Q3KNJ2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nhej1Q3KNJ2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Nhej1Q3KNJ2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Nhej1Q3KNJ2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Nhej1Q3KNJ2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nhej1Q3KNJ2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nhej1Q3KNJ2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nhej1Q3KNJ2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nhej1Q3KNJ2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nhej1Q3KNJ2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms