Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd8Q09XV5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd8Q09XV5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd8Q09XV5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd8Q09XV5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd8Q09XV5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd8Q09XV5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd8Q09XV5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd8Q09XV5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd8Q09XV5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd8Q09XV5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd8Q09XV5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chd8Q09XV5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd8Q09XV5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd8Q09XV5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd8Q09XV5 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.34■□□□□ 0.53
Chd8Q09XV5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd8Q09XV5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd8Q09XV5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd8Q09XV5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chd8Q09XV5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd8Q09XV5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd8Q09XV5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd8Q09XV5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.33■□□□□ 0.52
Chd8Q09XV5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd8Q09XV5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd8Q09XV5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd8Q09XV5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.32■□□□□ 0.52
Chd8Q09XV5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chd8Q09XV5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chd8Q09XV5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd8Q09XV5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chd8Q09XV5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd8Q09XV5 Gm44771-201ENSMUST00000206975 626 ntBASIC18.32■□□□□ 0.52
Chd8Q09XV5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd8Q09XV5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd8Q09XV5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.31■□□□□ 0.52
Chd8Q09XV5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Chd8Q09XV5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd8Q09XV5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd8Q09XV5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd8Q09XV5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd8Q09XV5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Chd8Q09XV5 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.3■□□□□ 0.52
Chd8Q09XV5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd8Q09XV5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd8Q09XV5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.3■□□□□ 0.52
Chd8Q09XV5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chd8Q09XV5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd8Q09XV5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd8Q09XV5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Chd8Q09XV5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd8Q09XV5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd8Q09XV5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd8Q09XV5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd8Q09XV5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Chd8Q09XV5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chd8Q09XV5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd8Q09XV5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.29■□□□□ 0.52
Chd8Q09XV5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd8Q09XV5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd8Q09XV5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Chd8Q09XV5 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.28■□□□□ 0.52
Chd8Q09XV5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Chd8Q09XV5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd8Q09XV5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Chd8Q09XV5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd8Q09XV5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Chd8Q09XV5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd8Q09XV5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.27■□□□□ 0.52
Chd8Q09XV5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd8Q09XV5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd8Q09XV5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.27■□□□□ 0.52
Chd8Q09XV5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chd8Q09XV5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Chd8Q09XV5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd8Q09XV5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Chd8Q09XV5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.27■□□□□ 0.51
Chd8Q09XV5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Chd8Q09XV5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Chd8Q09XV5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd8Q09XV5 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Chd8Q09XV5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chd8Q09XV5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.26■□□□□ 0.51
Chd8Q09XV5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.26■□□□□ 0.51
Chd8Q09XV5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd8Q09XV5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Chd8Q09XV5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Chd8Q09XV5 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Chd8Q09XV5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Chd8Q09XV5 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd8Q09XV5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.25■□□□□ 0.51
Chd8Q09XV5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Chd8Q09XV5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd8Q09XV5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.25■□□□□ 0.51
Chd8Q09XV5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chd8Q09XV5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chd8Q09XV5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.25■□□□□ 0.51
Chd8Q09XV5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chd8Q09XV5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms