Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Smn1P97801 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smn1P97801 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smn1P97801 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Smn1P97801 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smn1P97801 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smn1P97801 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smn1P97801 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smn1P97801 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smn1P97801 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.13■□□□□ 0.33
Smn1P97801 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Smn1P97801 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.13■□□□□ 0.33
Smn1P97801 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.13■□□□□ 0.33
Smn1P97801 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smn1P97801 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smn1P97801 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smn1P97801 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smn1P97801 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Smn1P97801 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smn1P97801 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smn1P97801 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smn1P97801 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smn1P97801 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smn1P97801 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smn1P97801 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smn1P97801 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smn1P97801 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smn1P97801 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smn1P97801 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Smn1P97801 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smn1P97801 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smn1P97801 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Smn1P97801 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smn1P97801 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smn1P97801 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smn1P97801 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smn1P97801 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smn1P97801 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smn1P97801 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smn1P97801 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Smn1P97801 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smn1P97801 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smn1P97801 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.1■□□□□ 0.33
Smn1P97801 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smn1P97801 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smn1P97801 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Smn1P97801 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smn1P97801 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smn1P97801 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smn1P97801 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.09■□□□□ 0.33
Smn1P97801 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smn1P97801 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smn1P97801 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.09■□□□□ 0.33
Smn1P97801 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smn1P97801 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smn1P97801 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Smn1P97801 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smn1P97801 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smn1P97801 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smn1P97801 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Smn1P97801 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.08■□□□□ 0.32
Smn1P97801 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smn1P97801 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smn1P97801 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smn1P97801 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.08■□□□□ 0.32
Smn1P97801 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smn1P97801 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smn1P97801 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smn1P97801 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smn1P97801 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smn1P97801 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Smn1P97801 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smn1P97801 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smn1P97801 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smn1P97801 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.07■□□□□ 0.32
Smn1P97801 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Smn1P97801 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smn1P97801 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smn1P97801 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smn1P97801 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smn1P97801 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smn1P97801 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smn1P97801 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Smn1P97801 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smn1P97801 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smn1P97801 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smn1P97801 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smn1P97801 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smn1P97801 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smn1P97801 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smn1P97801 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smn1P97801 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.05■□□□□ 0.32
Smn1P97801 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smn1P97801 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smn1P97801 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smn1P97801 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.05■□□□□ 0.32
Smn1P97801 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smn1P97801 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smn1P97801 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smn1P97801 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 909.8 ms