Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SgcbP82349 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SgcbP82349 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.84■□□□□ 0.45
SgcbP82349 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.84■□□□□ 0.45
SgcbP82349 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SgcbP82349 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SgcbP82349 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.83■□□□□ 0.45
SgcbP82349 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SgcbP82349 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SgcbP82349 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SgcbP82349 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SgcbP82349 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SgcbP82349 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.83■□□□□ 0.44
SgcbP82349 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SgcbP82349 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SgcbP82349 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SgcbP82349 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SgcbP82349 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SgcbP82349 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SgcbP82349 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SgcbP82349 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SgcbP82349 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcbP82349 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcbP82349 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.82■□□□□ 0.44
SgcbP82349 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcbP82349 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SgcbP82349 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.82■□□□□ 0.44
SgcbP82349 Gm27454-201ENSMUST00000185090 204 ntBASIC17.82■□□□□ 0.44
SgcbP82349 Gm43137-201ENSMUST00000198052 594 ntBASIC17.82■□□□□ 0.44
SgcbP82349 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SgcbP82349 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcbP82349 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcbP82349 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SgcbP82349 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SgcbP82349 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SgcbP82349 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SgcbP82349 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgcbP82349 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgcbP82349 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgcbP82349 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SgcbP82349 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.81■□□□□ 0.44
SgcbP82349 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.81■□□□□ 0.44
SgcbP82349 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SgcbP82349 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SgcbP82349 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgcbP82349 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgcbP82349 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgcbP82349 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.8■□□□□ 0.44
SgcbP82349 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SgcbP82349 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SgcbP82349 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgcbP82349 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgcbP82349 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgcbP82349 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgcbP82349 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SgcbP82349 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SgcbP82349 Mir6236-201ENSMUST00000184437 123 ntBASIC17.79■□□□□ 0.44
SgcbP82349 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgcbP82349 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgcbP82349 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgcbP82349 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SgcbP82349 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgcbP82349 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgcbP82349 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SgcbP82349 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SgcbP82349 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgcbP82349 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgcbP82349 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SgcbP82349 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgcbP82349 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgcbP82349 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgcbP82349 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SgcbP82349 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.77■□□□□ 0.44
SgcbP82349 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SgcbP82349 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.77■□□□□ 0.44
SgcbP82349 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SgcbP82349 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SgcbP82349 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SgcbP82349 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.77■□□□□ 0.44
SgcbP82349 Gm45417-201ENSMUST00000209533 758 ntBASIC17.77■□□□□ 0.44
SgcbP82349 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SgcbP82349 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SgcbP82349 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SgcbP82349 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SgcbP82349 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgcbP82349 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgcbP82349 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SgcbP82349 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.76■□□□□ 0.43
SgcbP82349 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SgcbP82349 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgcbP82349 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SgcbP82349 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgcbP82349 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgcbP82349 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SgcbP82349 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SgcbP82349 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SgcbP82349 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgcbP82349 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.75■□□□□ 0.43
SgcbP82349 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.75■□□□□ 0.43
SgcbP82349 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms