Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ThraP63058 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ThraP63058 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ThraP63058 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ThraP63058 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ThraP63058 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ThraP63058 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ThraP63058 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ThraP63058 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.15■□□□□ 0.82
ThraP63058 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ThraP63058 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
ThraP63058 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ThraP63058 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ThraP63058 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.15■□□□□ 0.82
ThraP63058 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ThraP63058 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ThraP63058 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ThraP63058 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ThraP63058 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ThraP63058 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ThraP63058 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ThraP63058 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ThraP63058 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ThraP63058 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ThraP63058 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ThraP63058 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
ThraP63058 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.14■□□□□ 0.81
ThraP63058 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ThraP63058 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ThraP63058 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ThraP63058 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ThraP63058 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ThraP63058 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ThraP63058 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ThraP63058 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ThraP63058 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ThraP63058 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.13■□□□□ 0.81
ThraP63058 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ThraP63058 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ThraP63058 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.13■□□□□ 0.81
ThraP63058 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.13■□□□□ 0.81
ThraP63058 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.13■□□□□ 0.81
ThraP63058 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ThraP63058 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ThraP63058 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ThraP63058 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ThraP63058 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ThraP63058 Gm9870-201ENSMUST00000063874 645 ntBASIC20.12■□□□□ 0.81
ThraP63058 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ThraP63058 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ThraP63058 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
ThraP63058 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.12■□□□□ 0.81
ThraP63058 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ThraP63058 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ThraP63058 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ThraP63058 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
ThraP63058 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.11■□□□□ 0.81
ThraP63058 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.11■□□□□ 0.81
ThraP63058 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ThraP63058 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ThraP63058 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ThraP63058 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
ThraP63058 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ThraP63058 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ThraP63058 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ThraP63058 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ThraP63058 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ThraP63058 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ThraP63058 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ThraP63058 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ThraP63058 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.1■□□□□ 0.81
ThraP63058 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
ThraP63058 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ThraP63058 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ThraP63058 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ThraP63058 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ThraP63058 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ThraP63058 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ThraP63058 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ThraP63058 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ThraP63058 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ThraP63058 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ThraP63058 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
ThraP63058 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ThraP63058 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
ThraP63058 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ThraP63058 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ThraP63058 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.08■□□□□ 0.81
ThraP63058 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.08■□□□□ 0.81
ThraP63058 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.08■□□□□ 0.81
ThraP63058 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ThraP63058 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ThraP63058 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ThraP63058 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ThraP63058 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ThraP63058 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ThraP63058 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ThraP63058 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
ThraP63058 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ThraP63058 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms