Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx1P63006 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Lhx1P63006 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx1P63006 Gm12251-201ENSMUST00000117893 792 ntBASIC19.74■□□□□ 0.75
Lhx1P63006 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx1P63006 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx1P63006 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx1P63006 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.73■□□□□ 0.75
Lhx1P63006 Gm43173-201ENSMUST00000202246 593 ntBASIC19.73■□□□□ 0.75
Lhx1P63006 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.73■□□□□ 0.75
Lhx1P63006 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx1P63006 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.72■□□□□ 0.75
Lhx1P63006 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx1P63006 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx1P63006 Gm43017-201ENSMUST00000198296 752 ntBASIC19.72■□□□□ 0.75
Lhx1P63006 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx1P63006 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx1P63006 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx1P63006 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx1P63006 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx1P63006 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx1P63006 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx1P63006 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx1P63006 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx1P63006 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx1P63006 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx1P63006 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx1P63006 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Lhx1P63006 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx1P63006 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx1P63006 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx1P63006 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.71■□□□□ 0.75
Lhx1P63006 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.71■□□□□ 0.75
Lhx1P63006 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx1P63006 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx1P63006 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx1P63006 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.7■□□□□ 0.74
Lhx1P63006 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.7■□□□□ 0.74
Lhx1P63006 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx1P63006 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx1P63006 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx1P63006 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.69■□□□□ 0.74
Lhx1P63006 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx1P63006 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Lhx1P63006 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.69■□□□□ 0.74
Lhx1P63006 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.69■□□□□ 0.74
Lhx1P63006 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.69■□□□□ 0.74
Lhx1P63006 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx1P63006 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Lhx1P63006 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Lhx1P63006 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx1P63006 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Lhx1P63006 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx1P63006 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.68■□□□□ 0.74
Lhx1P63006 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx1P63006 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Lhx1P63006 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.68■□□□□ 0.74
Lhx1P63006 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Lhx1P63006 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx1P63006 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx1P63006 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx1P63006 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.68■□□□□ 0.74
Lhx1P63006 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx1P63006 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx1P63006 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx1P63006 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx1P63006 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx1P63006 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx1P63006 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx1P63006 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx1P63006 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.67■□□□□ 0.74
Lhx1P63006 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx1P63006 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx1P63006 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx1P63006 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx1P63006 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx1P63006 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx1P63006 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx1P63006 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx1P63006 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Lhx1P63006 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.66■□□□□ 0.74
Lhx1P63006 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx1P63006 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx1P63006 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx1P63006 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Lhx1P63006 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.66■□□□□ 0.74
Lhx1P63006 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx1P63006 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx1P63006 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx1P63006 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Lhx1P63006 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx1P63006 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx1P63006 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx1P63006 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx1P63006 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
Lhx1P63006 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx1P63006 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lhx1P63006 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lhx1P63006 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Lhx1P63006 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms