Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nub1P54729 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Nub1P54729 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Nub1P54729 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nub1P54729 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nub1P54729 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.5■■□□□ 1.03
Nub1P54729 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nub1P54729 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nub1P54729 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
Nub1P54729 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nub1P54729 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nub1P54729 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nub1P54729 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.49■■□□□ 1.03
Nub1P54729 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.49■■□□□ 1.03
Nub1P54729 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.49■■□□□ 1.03
Nub1P54729 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.49■■□□□ 1.03
Nub1P54729 Gm13241-201ENSMUST00000094493 780 ntBASIC21.49■■□□□ 1.03
Nub1P54729 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nub1P54729 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nub1P54729 Notumos-201ENSMUST00000151998 2659 ntBASIC21.49■■□□□ 1.03
Nub1P54729 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nub1P54729 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nub1P54729 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nub1P54729 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nub1P54729 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Nub1P54729 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Nub1P54729 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Nub1P54729 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.47■■□□□ 1.03
Nub1P54729 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nub1P54729 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nub1P54729 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
Nub1P54729 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Nub1P54729 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Nub1P54729 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nub1P54729 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nub1P54729 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.46■■□□□ 1.03
Nub1P54729 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Nub1P54729 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.46■■□□□ 1.03
Nub1P54729 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.46■■□□□ 1.03
Nub1P54729 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.46■■□□□ 1.03
Nub1P54729 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Nub1P54729 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nub1P54729 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nub1P54729 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nub1P54729 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nub1P54729 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nub1P54729 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nub1P54729 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nub1P54729 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nub1P54729 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.45■■□□□ 1.02
Nub1P54729 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.45■■□□□ 1.02
Nub1P54729 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nub1P54729 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nub1P54729 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nub1P54729 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.45■■□□□ 1.02
Nub1P54729 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Nub1P54729 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nub1P54729 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nub1P54729 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nub1P54729 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nub1P54729 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.44■■□□□ 1.02
Nub1P54729 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.44■■□□□ 1.02
Nub1P54729 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nub1P54729 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nub1P54729 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nub1P54729 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nub1P54729 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Nub1P54729 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nub1P54729 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.43■■□□□ 1.02
Nub1P54729 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nub1P54729 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nub1P54729 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nub1P54729 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nub1P54729 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nub1P54729 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nub1P54729 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.42■■□□□ 1.02
Nub1P54729 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nub1P54729 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Nub1P54729 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Nub1P54729 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nub1P54729 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Nub1P54729 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nub1P54729 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nub1P54729 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Nub1P54729 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nub1P54729 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nub1P54729 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Nub1P54729 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nub1P54729 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Nub1P54729 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Nub1P54729 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nub1P54729 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.4■■□□□ 1.02
Nub1P54729 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nub1P54729 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nub1P54729 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.4■■□□□ 1.02
Nub1P54729 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Nub1P54729 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Nub1P54729 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Nub1P54729 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Nub1P54729 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms