Protein–RNA interactions for Protein: P54279

Pms2, Mismatch repair endonuclease PMS2, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pms2P54279 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pms2P54279 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pms2P54279 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pms2P54279 Gm40881-201ENSMUST00000223397 166 ntBASIC20.53■□□□□ 0.88
Pms2P54279 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pms2P54279 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pms2P54279 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pms2P54279 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pms2P54279 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Pms2P54279 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pms2P54279 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pms2P54279 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pms2P54279 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Pms2P54279 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pms2P54279 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pms2P54279 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pms2P54279 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pms2P54279 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pms2P54279 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pms2P54279 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pms2P54279 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pms2P54279 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pms2P54279 Gm7143-201ENSMUST00000222811 859 ntBASIC20.5■□□□□ 0.87
Pms2P54279 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pms2P54279 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.5■□□□□ 0.87
Pms2P54279 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pms2P54279 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.5■□□□□ 0.87
Pms2P54279 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pms2P54279 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pms2P54279 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pms2P54279 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.49■□□□□ 0.87
Pms2P54279 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.49■□□□□ 0.87
Pms2P54279 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pms2P54279 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pms2P54279 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pms2P54279 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pms2P54279 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Pms2P54279 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pms2P54279 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pms2P54279 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pms2P54279 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pms2P54279 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pms2P54279 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pms2P54279 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pms2P54279 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pms2P54279 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pms2P54279 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pms2P54279 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pms2P54279 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pms2P54279 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pms2P54279 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pms2P54279 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pms2P54279 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pms2P54279 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pms2P54279 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pms2P54279 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pms2P54279 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pms2P54279 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pms2P54279 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pms2P54279 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pms2P54279 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pms2P54279 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.46■□□□□ 0.87
Pms2P54279 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pms2P54279 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.46■□□□□ 0.87
Pms2P54279 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.46■□□□□ 0.87
Pms2P54279 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pms2P54279 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pms2P54279 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pms2P54279 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pms2P54279 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pms2P54279 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pms2P54279 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pms2P54279 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pms2P54279 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.45■□□□□ 0.86
Pms2P54279 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.45■□□□□ 0.86
Pms2P54279 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.45■□□□□ 0.86
Pms2P54279 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pms2P54279 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pms2P54279 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pms2P54279 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pms2P54279 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pms2P54279 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pms2P54279 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pms2P54279 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pms2P54279 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pms2P54279 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pms2P54279 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pms2P54279 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Pms2P54279 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pms2P54279 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.43■□□□□ 0.86
Pms2P54279 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pms2P54279 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pms2P54279 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
Pms2P54279 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pms2P54279 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pms2P54279 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pms2P54279 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.42■□□□□ 0.86
Pms2P54279 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pms2P54279 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pms2P54279 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms