Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nek1P51954 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nek1P51954 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nek1P51954 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nek1P51954 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Nek1P51954 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nek1P51954 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nek1P51954 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nek1P51954 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Nek1P51954 Gm22238-201ENSMUST00000175222 88 ntBASIC22.31■■□□□ 1.16
Nek1P51954 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.31■■□□□ 1.16
Nek1P51954 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Nek1P51954 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nek1P51954 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Nek1P51954 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nek1P51954 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nek1P51954 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nek1P51954 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Nek1P51954 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Nek1P51954 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Nek1P51954 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.3■■□□□ 1.16
Nek1P51954 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nek1P51954 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Nek1P51954 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Nek1P51954 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nek1P51954 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Nek1P51954 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC22.3■■□□□ 1.16
Nek1P51954 Iqck-206ENSMUST00000208658 2891 ntBASIC22.3■■□□□ 1.16
Nek1P51954 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nek1P51954 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Nek1P51954 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Nek1P51954 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nek1P51954 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Nek1P51954 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.29■■□□□ 1.16
Nek1P51954 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nek1P51954 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Nek1P51954 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Nek1P51954 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nek1P51954 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nek1P51954 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nek1P51954 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Nek1P51954 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nek1P51954 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nek1P51954 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nek1P51954 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nek1P51954 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.28■■□□□ 1.16
Nek1P51954 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nek1P51954 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Nek1P51954 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nek1P51954 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Nek1P51954 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Nek1P51954 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nek1P51954 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nek1P51954 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nek1P51954 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nek1P51954 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.26■■□□□ 1.15
Nek1P51954 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nek1P51954 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Nek1P51954 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Nek1P51954 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Nek1P51954 Gm21956-201ENSMUST00000179946 522 ntBASIC22.25■■□□□ 1.15
Nek1P51954 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.25■■□□□ 1.15
Nek1P51954 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Nek1P51954 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Nek1P51954 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Nek1P51954 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Nek1P51954 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nek1P51954 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nek1P51954 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Nek1P51954 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nek1P51954 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nek1P51954 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.24■■□□□ 1.15
Nek1P51954 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nek1P51954 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Nek1P51954 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nek1P51954 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nek1P51954 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nek1P51954 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nek1P51954 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.23■■□□□ 1.15
Nek1P51954 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nek1P51954 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC22.23■■□□□ 1.15
Nek1P51954 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Nek1P51954 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.23■■□□□ 1.15
Nek1P51954 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.23■■□□□ 1.15
Nek1P51954 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Nek1P51954 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.23■■□□□ 1.15
Nek1P51954 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.23■■□□□ 1.15
Nek1P51954 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Nek1P51954 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Nek1P51954 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
Nek1P51954 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Nek1P51954 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Nek1P51954 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Nek1P51954 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.22■■□□□ 1.15
Nek1P51954 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.22■■□□□ 1.15
Nek1P51954 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Nek1P51954 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC22.21■■□□□ 1.15
Nek1P51954 Gm10616-201ENSMUST00000205285 2127 ntBASIC22.21■■□□□ 1.15
Nek1P51954 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nek1P51954 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms