Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt6aP50446 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Krt6aP50446 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Krt6aP50446 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt6aP50446 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Krt6aP50446 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt6aP50446 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.87■□□□□ 0.77
Krt6aP50446 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.87■□□□□ 0.77
Krt6aP50446 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Krt6aP50446 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Krt6aP50446 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Krt6aP50446 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.87■□□□□ 0.77
Krt6aP50446 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt6aP50446 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt6aP50446 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Krt6aP50446 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.86■□□□□ 0.77
Krt6aP50446 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Krt6aP50446 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt6aP50446 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt6aP50446 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Krt6aP50446 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt6aP50446 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Krt6aP50446 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Krt6aP50446 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Krt6aP50446 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt6aP50446 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt6aP50446 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt6aP50446 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt6aP50446 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Krt6aP50446 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt6aP50446 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt6aP50446 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Krt6aP50446 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.84■□□□□ 0.77
Krt6aP50446 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Krt6aP50446 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Krt6aP50446 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.84■□□□□ 0.77
Krt6aP50446 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Krt6aP50446 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Krt6aP50446 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Krt6aP50446 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.83■□□□□ 0.77
Krt6aP50446 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt6aP50446 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt6aP50446 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.83■□□□□ 0.76
Krt6aP50446 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.83■□□□□ 0.76
Krt6aP50446 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt6aP50446 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Krt6aP50446 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt6aP50446 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt6aP50446 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt6aP50446 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt6aP50446 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt6aP50446 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.82■□□□□ 0.76
Krt6aP50446 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt6aP50446 Gm10232-201ENSMUST00000089221 720 ntBASIC19.82■□□□□ 0.76
Krt6aP50446 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.82■□□□□ 0.76
Krt6aP50446 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt6aP50446 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.82■□□□□ 0.76
Krt6aP50446 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Krt6aP50446 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.81■□□□□ 0.76
Krt6aP50446 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.81■□□□□ 0.76
Krt6aP50446 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt6aP50446 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Krt6aP50446 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Krt6aP50446 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt6aP50446 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt6aP50446 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt6aP50446 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt6aP50446 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt6aP50446 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.8■□□□□ 0.76
Krt6aP50446 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Krt6aP50446 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Krt6aP50446 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.8■□□□□ 0.76
Krt6aP50446 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.8■□□□□ 0.76
Krt6aP50446 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt6aP50446 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Krt6aP50446 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt6aP50446 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Krt6aP50446 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt6aP50446 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt6aP50446 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Krt6aP50446 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Krt6aP50446 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt6aP50446 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Krt6aP50446 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt6aP50446 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt6aP50446 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt6aP50446 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt6aP50446 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Krt6aP50446 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Krt6aP50446 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Krt6aP50446 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt6aP50446 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt6aP50446 Gm7143-201ENSMUST00000222811 859 ntBASIC19.77■□□□□ 0.76
Krt6aP50446 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Krt6aP50446 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt6aP50446 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt6aP50446 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Krt6aP50446 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt6aP50446 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.77■□□□□ 0.75
Krt6aP50446 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms