Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Srp9P49962 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Srp9P49962 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Srp9P49962 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Srp9P49962 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Srp9P49962 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Srp9P49962 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp9P49962 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Srp9P49962 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp9P49962 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.9■□□□□ 0.3
Srp9P49962 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp9P49962 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp9P49962 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp9P49962 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp9P49962 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp9P49962 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Srp9P49962 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Srp9P49962 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Srp9P49962 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Srp9P49962 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Srp9P49962 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Srp9P49962 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Srp9P49962 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Srp9P49962 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Srp9P49962 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Srp9P49962 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Srp9P49962 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Srp9P49962 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Srp9P49962 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Srp9P49962 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.89■□□□□ 0.29
Srp9P49962 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp9P49962 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.88■□□□□ 0.29
Srp9P49962 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp9P49962 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.88■□□□□ 0.29
Srp9P49962 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.88■□□□□ 0.29
Srp9P49962 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Srp9P49962 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Srp9P49962 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Srp9P49962 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp9P49962 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.88■□□□□ 0.29
Srp9P49962 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.88■□□□□ 0.29
Srp9P49962 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.88■□□□□ 0.29
Srp9P49962 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Srp9P49962 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.88■□□□□ 0.29
Srp9P49962 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Srp9P49962 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
Srp9P49962 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Srp9P49962 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Srp9P49962 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.88■□□□□ 0.29
Srp9P49962 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp9P49962 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.87■□□□□ 0.29
Srp9P49962 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp9P49962 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.87■□□□□ 0.29
Srp9P49962 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp9P49962 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp9P49962 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp9P49962 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Srp9P49962 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp9P49962 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp9P49962 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp9P49962 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp9P49962 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Srp9P49962 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Srp9P49962 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.87■□□□□ 0.29
Srp9P49962 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp9P49962 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.87■□□□□ 0.29
Srp9P49962 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Srp9P49962 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp9P49962 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp9P49962 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp9P49962 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Srp9P49962 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Srp9P49962 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp9P49962 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp9P49962 Gm10399-202ENSMUST00000202768 748 ntBASIC16.86■□□□□ 0.29
Srp9P49962 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp9P49962 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Srp9P49962 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp9P49962 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp9P49962 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.86■□□□□ 0.29
Srp9P49962 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp9P49962 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Srp9P49962 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp9P49962 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.85■□□□□ 0.29
Srp9P49962 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp9P49962 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp9P49962 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Srp9P49962 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Srp9P49962 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.85■□□□□ 0.29
Srp9P49962 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp9P49962 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp9P49962 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp9P49962 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp9P49962 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Srp9P49962 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Srp9P49962 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp9P49962 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp9P49962 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp9P49962 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srp9P49962 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms