Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GdnfP48540 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
GdnfP48540 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GdnfP48540 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
GdnfP48540 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
GdnfP48540 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GdnfP48540 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.44■□□□□ 0.38
GdnfP48540 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GdnfP48540 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GdnfP48540 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GdnfP48540 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GdnfP48540 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.43■□□□□ 0.38
GdnfP48540 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GdnfP48540 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GdnfP48540 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
GdnfP48540 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
GdnfP48540 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GdnfP48540 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GdnfP48540 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.43■□□□□ 0.38
GdnfP48540 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GdnfP48540 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GdnfP48540 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GdnfP48540 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GdnfP48540 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GdnfP48540 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
GdnfP48540 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
GdnfP48540 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GdnfP48540 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GdnfP48540 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GdnfP48540 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.41■□□□□ 0.38
GdnfP48540 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.41■□□□□ 0.38
GdnfP48540 Gm5812-201ENSMUST00000061073 957 ntBASIC17.41■□□□□ 0.38
GdnfP48540 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GdnfP48540 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
GdnfP48540 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GdnfP48540 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GdnfP48540 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
GdnfP48540 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GdnfP48540 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GdnfP48540 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.41■□□□□ 0.38
GdnfP48540 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GdnfP48540 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GdnfP48540 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
GdnfP48540 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GdnfP48540 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GdnfP48540 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GdnfP48540 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GdnfP48540 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GdnfP48540 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GdnfP48540 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
GdnfP48540 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GdnfP48540 Gm10232-201ENSMUST00000089221 720 ntBASIC17.39■□□□□ 0.37
GdnfP48540 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.39■□□□□ 0.37
GdnfP48540 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GdnfP48540 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GdnfP48540 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GdnfP48540 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GdnfP48540 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
GdnfP48540 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
GdnfP48540 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GdnfP48540 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GdnfP48540 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.38■□□□□ 0.37
GdnfP48540 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.38■□□□□ 0.37
GdnfP48540 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GdnfP48540 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.38■□□□□ 0.37
GdnfP48540 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GdnfP48540 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GdnfP48540 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GdnfP48540 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GdnfP48540 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GdnfP48540 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GdnfP48540 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.38■□□□□ 0.37
GdnfP48540 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GdnfP48540 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GdnfP48540 Gm15820-201ENSMUST00000201566 728 ntBASIC17.37■□□□□ 0.37
GdnfP48540 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.37■□□□□ 0.37
GdnfP48540 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.37■□□□□ 0.37
GdnfP48540 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.37■□□□□ 0.37
GdnfP48540 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GdnfP48540 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GdnfP48540 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GdnfP48540 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GdnfP48540 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GdnfP48540 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GdnfP48540 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.36■□□□□ 0.37
GdnfP48540 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GdnfP48540 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GdnfP48540 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GdnfP48540 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GdnfP48540 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GdnfP48540 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GdnfP48540 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GdnfP48540 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
GdnfP48540 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GdnfP48540 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GdnfP48540 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GdnfP48540 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GdnfP48540 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GdnfP48540 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GdnfP48540 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms