Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Vps4bP46467 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps4bP46467 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps4bP46467 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps4bP46467 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.25■□□□□ 0.83
Vps4bP46467 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps4bP46467 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vps4bP46467 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps4bP46467 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps4bP46467 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps4bP46467 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps4bP46467 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps4bP46467 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Vps4bP46467 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vps4bP46467 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps4bP46467 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Vps4bP46467 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps4bP46467 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps4bP46467 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps4bP46467 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps4bP46467 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps4bP46467 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Vps4bP46467 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps4bP46467 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vps4bP46467 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vps4bP46467 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps4bP46467 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps4bP46467 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps4bP46467 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps4bP46467 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps4bP46467 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps4bP46467 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.22■□□□□ 0.83
Vps4bP46467 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.22■□□□□ 0.83
Vps4bP46467 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Vps4bP46467 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps4bP46467 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps4bP46467 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps4bP46467 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.21■□□□□ 0.83
Vps4bP46467 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps4bP46467 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps4bP46467 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.21■□□□□ 0.83
Vps4bP46467 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Vps4bP46467 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps4bP46467 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps4bP46467 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps4bP46467 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Vps4bP46467 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps4bP46467 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps4bP46467 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps4bP46467 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps4bP46467 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps4bP46467 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps4bP46467 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Vps4bP46467 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vps4bP46467 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps4bP46467 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps4bP46467 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps4bP46467 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps4bP46467 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps4bP46467 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vps4bP46467 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.19■□□□□ 0.82
Vps4bP46467 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Vps4bP46467 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps4bP46467 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Vps4bP46467 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Vps4bP46467 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps4bP46467 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Vps4bP46467 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.19■□□□□ 0.82
Vps4bP46467 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.19■□□□□ 0.82
Vps4bP46467 Gm9959-201ENSMUST00000068277 390 ntBASIC20.19■□□□□ 0.82
Vps4bP46467 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Vps4bP46467 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps4bP46467 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Vps4bP46467 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Vps4bP46467 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vps4bP46467 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Vps4bP46467 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Vps4bP46467 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.18■□□□□ 0.82
Vps4bP46467 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps4bP46467 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps4bP46467 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps4bP46467 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps4bP46467 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps4bP46467 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Vps4bP46467 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps4bP46467 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vps4bP46467 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps4bP46467 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps4bP46467 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps4bP46467 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.17■□□□□ 0.82
Vps4bP46467 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Vps4bP46467 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps4bP46467 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vps4bP46467 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps4bP46467 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.17■□□□□ 0.82
Vps4bP46467 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps4bP46467 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.16■□□□□ 0.82
Vps4bP46467 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vps4bP46467 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.16■□□□□ 0.82
Vps4bP46467 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms