Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gdf6P43028 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gdf6P43028 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gdf6P43028 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gdf6P43028 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gdf6P43028 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gdf6P43028 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gdf6P43028 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gdf6P43028 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gdf6P43028 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gdf6P43028 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gdf6P43028 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Gdf6P43028 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gdf6P43028 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.16■□□□□ 0.98
Gdf6P43028 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Gdf6P43028 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.15■□□□□ 0.98
Gdf6P43028 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gdf6P43028 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gdf6P43028 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.15■□□□□ 0.98
Gdf6P43028 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gdf6P43028 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Gdf6P43028 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gdf6P43028 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gdf6P43028 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gdf6P43028 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gdf6P43028 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Gdf6P43028 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gdf6P43028 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Gdf6P43028 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gdf6P43028 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gdf6P43028 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gdf6P43028 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.13■□□□□ 0.97
Gdf6P43028 Gm5874-201ENSMUST00000096101 508 ntBASIC21.13■□□□□ 0.97
Gdf6P43028 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gdf6P43028 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gdf6P43028 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Gdf6P43028 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gdf6P43028 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gdf6P43028 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Gdf6P43028 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gdf6P43028 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Gdf6P43028 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gdf6P43028 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gdf6P43028 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gdf6P43028 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gdf6P43028 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Gdf6P43028 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gdf6P43028 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gdf6P43028 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gdf6P43028 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Gdf6P43028 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.11■□□□□ 0.97
Gdf6P43028 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gdf6P43028 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gdf6P43028 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Gdf6P43028 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gdf6P43028 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.1■□□□□ 0.97
Gdf6P43028 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.1■□□□□ 0.97
Gdf6P43028 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Gdf6P43028 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gdf6P43028 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gdf6P43028 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gdf6P43028 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gdf6P43028 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gdf6P43028 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Gdf6P43028 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gdf6P43028 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gdf6P43028 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.09■□□□□ 0.97
Gdf6P43028 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Gdf6P43028 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gdf6P43028 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gdf6P43028 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.09■□□□□ 0.97
Gdf6P43028 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.09■□□□□ 0.97
Gdf6P43028 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.09■□□□□ 0.97
Gdf6P43028 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gdf6P43028 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Gdf6P43028 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gdf6P43028 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.08■□□□□ 0.97
Gdf6P43028 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gdf6P43028 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gdf6P43028 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gdf6P43028 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gdf6P43028 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gdf6P43028 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gdf6P43028 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gdf6P43028 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gdf6P43028 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Gdf6P43028 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gdf6P43028 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gdf6P43028 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gdf6P43028 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gdf6P43028 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gdf6P43028 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gdf6P43028 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gdf6P43028 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Gdf6P43028 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gdf6P43028 Gm11421-201ENSMUST00000122124 294 ntBASIC21.06■□□□□ 0.96
Gdf6P43028 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.06■□□□□ 0.96
Gdf6P43028 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gdf6P43028 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gdf6P43028 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms