Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox6P40645 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.67■□□□□ 0.58
Sox6P40645 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox6P40645 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.67■□□□□ 0.58
Sox6P40645 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox6P40645 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.67■□□□□ 0.58
Sox6P40645 Gm40881-201ENSMUST00000223397 166 ntBASIC18.67■□□□□ 0.58
Sox6P40645 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox6P40645 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox6P40645 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox6P40645 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox6P40645 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox6P40645 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sox6P40645 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox6P40645 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Sox6P40645 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox6P40645 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox6P40645 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.66■□□□□ 0.58
Sox6P40645 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sox6P40645 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.66■□□□□ 0.58
Sox6P40645 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox6P40645 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox6P40645 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox6P40645 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox6P40645 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sox6P40645 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Sox6P40645 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sox6P40645 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox6P40645 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox6P40645 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox6P40645 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox6P40645 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sox6P40645 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox6P40645 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.65■□□□□ 0.58
Sox6P40645 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox6P40645 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox6P40645 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox6P40645 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox6P40645 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Sox6P40645 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox6P40645 Etf1-202ENSMUST00000180351 108 ntBASIC18.64■□□□□ 0.57
Sox6P40645 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.64■□□□□ 0.57
Sox6P40645 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox6P40645 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.64■□□□□ 0.57
Sox6P40645 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Sox6P40645 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox6P40645 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox6P40645 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox6P40645 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox6P40645 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox6P40645 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox6P40645 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox6P40645 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.63■□□□□ 0.57
Sox6P40645 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox6P40645 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox6P40645 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox6P40645 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox6P40645 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sox6P40645 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.63■□□□□ 0.57
Sox6P40645 Rps24-207ENSMUST00000224568 714 ntBASIC18.63■□□□□ 0.57
Sox6P40645 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.63■□□□□ 0.57
Sox6P40645 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox6P40645 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sox6P40645 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox6P40645 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox6P40645 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox6P40645 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox6P40645 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox6P40645 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox6P40645 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox6P40645 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.62■□□□□ 0.57
Sox6P40645 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sox6P40645 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox6P40645 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox6P40645 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox6P40645 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sox6P40645 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox6P40645 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Sox6P40645 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox6P40645 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.62■□□□□ 0.57
Sox6P40645 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.62■□□□□ 0.57
Sox6P40645 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox6P40645 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.61■□□□□ 0.57
Sox6P40645 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox6P40645 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox6P40645 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox6P40645 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sox6P40645 Gm7417-201ENSMUST00000192950 473 ntBASIC18.61■□□□□ 0.57
Sox6P40645 Gm9959-201ENSMUST00000068277 390 ntBASIC18.61■□□□□ 0.57
Sox6P40645 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox6P40645 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox6P40645 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox6P40645 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox6P40645 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox6P40645 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox6P40645 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.6■□□□□ 0.57
Sox6P40645 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sox6P40645 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.6■□□□□ 0.57
Sox6P40645 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox6P40645 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms