Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a11P31650 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a11P31650 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Slc6a11P31650 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a11P31650 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a11P31650 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a11P31650 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.98■□□□□ 0.63
Slc6a11P31650 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.98■□□□□ 0.63
Slc6a11P31650 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Slc6a11P31650 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Slc6a11P31650 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Slc6a11P31650 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Slc6a11P31650 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a11P31650 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a11P31650 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a11P31650 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.97■□□□□ 0.63
Slc6a11P31650 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Slc6a11P31650 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a11P31650 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Slc6a11P31650 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a11P31650 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a11P31650 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a11P31650 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a11P31650 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a11P31650 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.96■□□□□ 0.63
Slc6a11P31650 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.96■□□□□ 0.63
Slc6a11P31650 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a11P31650 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a11P31650 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Slc6a11P31650 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a11P31650 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a11P31650 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a11P31650 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a11P31650 Gm22238-201ENSMUST00000175222 88 ntBASIC18.95■□□□□ 0.62
Slc6a11P31650 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.95■□□□□ 0.62
Slc6a11P31650 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a11P31650 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Slc6a11P31650 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a11P31650 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.95■□□□□ 0.62
Slc6a11P31650 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.94■□□□□ 0.62
Slc6a11P31650 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.94■□□□□ 0.62
Slc6a11P31650 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.94■□□□□ 0.62
Slc6a11P31650 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a11P31650 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a11P31650 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a11P31650 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a11P31650 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a11P31650 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a11P31650 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a11P31650 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.93■□□□□ 0.62
Slc6a11P31650 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.93■□□□□ 0.62
Slc6a11P31650 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.93■□□□□ 0.62
Slc6a11P31650 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.93■□□□□ 0.62
Slc6a11P31650 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a11P31650 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a11P31650 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a11P31650 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Slc6a11P31650 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.92■□□□□ 0.62
Slc6a11P31650 Gm40881-201ENSMUST00000223397 166 ntBASIC18.92■□□□□ 0.62
Slc6a11P31650 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a11P31650 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a11P31650 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a11P31650 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a11P31650 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a11P31650 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Slc6a11P31650 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a11P31650 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a11P31650 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a11P31650 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Slc6a11P31650 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a11P31650 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a11P31650 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a11P31650 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a11P31650 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a11P31650 Gm21956-201ENSMUST00000179946 522 ntBASIC18.9■□□□□ 0.62
Slc6a11P31650 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Slc6a11P31650 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.9■□□□□ 0.62
Slc6a11P31650 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a11P31650 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a11P31650 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Slc6a11P31650 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a11P31650 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.89■□□□□ 0.61
Slc6a11P31650 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a11P31650 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a11P31650 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a11P31650 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.89■□□□□ 0.61
Slc6a11P31650 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a11P31650 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.89■□□□□ 0.61
Slc6a11P31650 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a11P31650 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a11P31650 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Slc6a11P31650 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.88■□□□□ 0.61
Slc6a11P31650 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a11P31650 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.88■□□□□ 0.61
Slc6a11P31650 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a11P31650 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a11P31650 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Slc6a11P31650 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a11P31650 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Slc6a11P31650 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms