Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Slc6a1P31648 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Slc6a1P31648 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a1P31648 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a1P31648 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a1P31648 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a1P31648 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a1P31648 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a1P31648 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc6a1P31648 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a1P31648 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a1P31648 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a1P31648 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.13■□□□□ 0.33
Slc6a1P31648 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a1P31648 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a1P31648 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a1P31648 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a1P31648 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a1P31648 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Slc6a1P31648 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a1P31648 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a1P31648 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a1P31648 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a1P31648 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a1P31648 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a1P31648 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a1P31648 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Slc6a1P31648 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a1P31648 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a1P31648 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a1P31648 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a1P31648 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a1P31648 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a1P31648 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a1P31648 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a1P31648 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a1P31648 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a1P31648 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Slc6a1P31648 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Slc6a1P31648 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a1P31648 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a1P31648 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a1P31648 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.1■□□□□ 0.33
Slc6a1P31648 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.1■□□□□ 0.33
Slc6a1P31648 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Slc6a1P31648 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a1P31648 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a1P31648 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a1P31648 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Slc6a1P31648 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a1P31648 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Slc6a1P31648 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a1P31648 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Slc6a1P31648 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a1P31648 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.09■□□□□ 0.33
Slc6a1P31648 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a1P31648 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a1P31648 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a1P31648 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a1P31648 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a1P31648 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a1P31648 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a1P31648 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a1P31648 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a1P31648 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a1P31648 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a1P31648 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a1P31648 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a1P31648 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a1P31648 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a1P31648 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.07■□□□□ 0.32
Slc6a1P31648 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a1P31648 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a1P31648 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a1P31648 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a1P31648 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a1P31648 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a1P31648 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a1P31648 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a1P31648 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a1P31648 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Slc6a1P31648 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a1P31648 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a1P31648 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc6a1P31648 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a1P31648 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a1P31648 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a1P31648 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a1P31648 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a1P31648 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a1P31648 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a1P31648 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Slc6a1P31648 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a1P31648 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a1P31648 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Slc6a1P31648 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Slc6a1P31648 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.06■□□□□ 0.32
Slc6a1P31648 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a1P31648 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a1P31648 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms