Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PdgfbP31240 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PdgfbP31240 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PdgfbP31240 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PdgfbP31240 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PdgfbP31240 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PdgfbP31240 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PdgfbP31240 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PdgfbP31240 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PdgfbP31240 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.3■□□□□ 0.84
PdgfbP31240 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfbP31240 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PdgfbP31240 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PdgfbP31240 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfbP31240 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfbP31240 Gm20760-201ENSMUST00000179197 648 ntBASIC20.29■□□□□ 0.84
PdgfbP31240 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfbP31240 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfbP31240 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfbP31240 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PdgfbP31240 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfbP31240 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PdgfbP31240 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PdgfbP31240 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PdgfbP31240 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PdgfbP31240 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.28■□□□□ 0.84
PdgfbP31240 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.28■□□□□ 0.84
PdgfbP31240 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PdgfbP31240 Gm27801-201ENSMUST00000184174 223 ntBASIC20.28■□□□□ 0.84
PdgfbP31240 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PdgfbP31240 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PdgfbP31240 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PdgfbP31240 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PdgfbP31240 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PdgfbP31240 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PdgfbP31240 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PdgfbP31240 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PdgfbP31240 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PdgfbP31240 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PdgfbP31240 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PdgfbP31240 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.26■□□□□ 0.83
PdgfbP31240 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PdgfbP31240 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PdgfbP31240 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PdgfbP31240 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PdgfbP31240 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PdgfbP31240 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PdgfbP31240 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PdgfbP31240 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PdgfbP31240 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PdgfbP31240 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PdgfbP31240 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PdgfbP31240 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfbP31240 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.24■□□□□ 0.83
PdgfbP31240 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfbP31240 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfbP31240 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.24■□□□□ 0.83
PdgfbP31240 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PdgfbP31240 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfbP31240 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.23■□□□□ 0.83
PdgfbP31240 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfbP31240 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfbP31240 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfbP31240 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PdgfbP31240 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.23■□□□□ 0.83
PdgfbP31240 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfbP31240 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PdgfbP31240 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfbP31240 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfbP31240 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfbP31240 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfbP31240 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfbP31240 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.22■□□□□ 0.83
PdgfbP31240 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfbP31240 Gm8520-201ENSMUST00000186517 868 ntBASIC20.22■□□□□ 0.83
PdgfbP31240 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.22■□□□□ 0.83
PdgfbP31240 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfbP31240 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfbP31240 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfbP31240 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfbP31240 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PdgfbP31240 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PdgfbP31240 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PdgfbP31240 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PdgfbP31240 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PdgfbP31240 Mir7071-201ENSMUST00000184847 69 ntBASIC20.21■□□□□ 0.83
PdgfbP31240 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
PdgfbP31240 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PdgfbP31240 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PdgfbP31240 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PdgfbP31240 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PdgfbP31240 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PdgfbP31240 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PdgfbP31240 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PdgfbP31240 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PdgfbP31240 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PdgfbP31240 Gm13148-201ENSMUST00000118892 745 ntBASIC20.2■□□□□ 0.82
PdgfbP31240 Gm22325-201ENSMUST00000158904 308 ntBASIC20.2■□□□□ 0.82
PdgfbP31240 Mir6236-201ENSMUST00000184437 123 ntBASIC20.2■□□□□ 0.82
PdgfbP31240 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms