Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf1bP25119 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf1bP25119 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf1bP25119 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf1bP25119 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf1bP25119 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf1bP25119 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf1bP25119 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf1bP25119 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.54■□□□□ 0.56
Tnfrsf1bP25119 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf1bP25119 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Tnfrsf1bP25119 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf1bP25119 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf1bP25119 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Tnfrsf1bP25119 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf1bP25119 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf1bP25119 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.53■□□□□ 0.56
Tnfrsf1bP25119 Mir6236-201ENSMUST00000184437 123 ntBASIC18.53■□□□□ 0.56
Tnfrsf1bP25119 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf1bP25119 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf1bP25119 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf1bP25119 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf1bP25119 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Tnfrsf1bP25119 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.53■□□□□ 0.56
Tnfrsf1bP25119 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf1bP25119 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf1bP25119 Gm12821-201ENSMUST00000120022 600 ntBASIC18.52■□□□□ 0.56
Tnfrsf1bP25119 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.52■□□□□ 0.56
Tnfrsf1bP25119 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Tnfrsf1bP25119 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf1bP25119 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.52■□□□□ 0.56
Tnfrsf1bP25119 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf1bP25119 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.52■□□□□ 0.56
Tnfrsf1bP25119 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf1bP25119 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf1bP25119 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.52■□□□□ 0.55
Tnfrsf1bP25119 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf1bP25119 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf1bP25119 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf1bP25119 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.51■□□□□ 0.55
Tnfrsf1bP25119 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Tnfrsf1bP25119 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf1bP25119 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Tnfrsf1bP25119 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1bP25119 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1bP25119 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1bP25119 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1bP25119 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1bP25119 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.5■□□□□ 0.55
Tnfrsf1bP25119 Gm43137-201ENSMUST00000198052 594 ntBASIC18.5■□□□□ 0.55
Tnfrsf1bP25119 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1bP25119 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1bP25119 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1bP25119 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Tnfrsf1bP25119 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1bP25119 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1bP25119 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf1bP25119 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Tnfrsf1bP25119 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf1bP25119 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf1bP25119 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf1bP25119 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tnfrsf1bP25119 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.49■□□□□ 0.55
Tnfrsf1bP25119 Gm27454-201ENSMUST00000185090 204 ntBASIC18.49■□□□□ 0.55
Tnfrsf1bP25119 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf1bP25119 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf1bP25119 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf1bP25119 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf1bP25119 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf1bP25119 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf1bP25119 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf1bP25119 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf1bP25119 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf1bP25119 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Tnfrsf1bP25119 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Tnfrsf1bP25119 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf1bP25119 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf1bP25119 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf1bP25119 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf1bP25119 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf1bP25119 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf1bP25119 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf1bP25119 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Tnfrsf1bP25119 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf1bP25119 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf1bP25119 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf1bP25119 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf1bP25119 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf1bP25119 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf1bP25119 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.55
Tnfrsf1bP25119 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.46■□□□□ 0.55
Tnfrsf1bP25119 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf1bP25119 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
Tnfrsf1bP25119 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.46■□□□□ 0.55
Tnfrsf1bP25119 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf1bP25119 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf1bP25119 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Tnfrsf1bP25119 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf1bP25119 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.45■□□□□ 0.54
Tnfrsf1bP25119 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms