Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccl3P10855 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.44
Ccl3P10855 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.83■□□□□ 0.44
Ccl3P10855 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccl3P10855 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccl3P10855 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.83■□□□□ 0.44
Ccl3P10855 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.83■□□□□ 0.44
Ccl3P10855 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ccl3P10855 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.83■□□□□ 0.44
Ccl3P10855 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccl3P10855 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccl3P10855 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccl3P10855 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccl3P10855 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccl3P10855 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccl3P10855 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccl3P10855 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccl3P10855 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccl3P10855 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Ccl3P10855 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.82■□□□□ 0.44
Ccl3P10855 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccl3P10855 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccl3P10855 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccl3P10855 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccl3P10855 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccl3P10855 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.82■□□□□ 0.44
Ccl3P10855 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccl3P10855 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccl3P10855 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccl3P10855 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ccl3P10855 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.81■□□□□ 0.44
Ccl3P10855 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.81■□□□□ 0.44
Ccl3P10855 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.81■□□□□ 0.44
Ccl3P10855 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.81■□□□□ 0.44
Ccl3P10855 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccl3P10855 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccl3P10855 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccl3P10855 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.81■□□□□ 0.44
Ccl3P10855 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccl3P10855 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccl3P10855 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccl3P10855 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccl3P10855 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccl3P10855 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccl3P10855 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.8■□□□□ 0.44
Ccl3P10855 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.8■□□□□ 0.44
Ccl3P10855 Gm10602-201ENSMUST00000098239 609 ntBASIC17.8■□□□□ 0.44
Ccl3P10855 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccl3P10855 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccl3P10855 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccl3P10855 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ccl3P10855 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccl3P10855 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ccl3P10855 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccl3P10855 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccl3P10855 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Ccl3P10855 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccl3P10855 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccl3P10855 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccl3P10855 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccl3P10855 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccl3P10855 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccl3P10855 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccl3P10855 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ccl3P10855 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccl3P10855 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccl3P10855 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Ccl3P10855 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.78■□□□□ 0.44
Ccl3P10855 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Ccl3P10855 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Ccl3P10855 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccl3P10855 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccl3P10855 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccl3P10855 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccl3P10855 Gm13234-201ENSMUST00000120010 747 ntBASIC17.77■□□□□ 0.44
Ccl3P10855 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccl3P10855 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.77■□□□□ 0.44
Ccl3P10855 Reep4-203ENSMUST00000226563 1444 ntBASIC17.77■□□□□ 0.44
Ccl3P10855 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccl3P10855 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccl3P10855 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccl3P10855 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl3P10855 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl3P10855 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl3P10855 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl3P10855 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.76■□□□□ 0.43
Ccl3P10855 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl3P10855 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl3P10855 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.76■□□□□ 0.43
Ccl3P10855 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl3P10855 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl3P10855 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl3P10855 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccl3P10855 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccl3P10855 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccl3P10855 Gm12933-201ENSMUST00000120203 872 ntBASIC17.75■□□□□ 0.43
Ccl3P10855 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.75■□□□□ 0.43
Ccl3P10855 Gm27801-201ENSMUST00000184174 223 ntBASIC17.75■□□□□ 0.43
Ccl3P10855 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccl3P10855 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms