Protein–RNA interactions for Protein: P08046

Egr1, Early growth response protein 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Egr1P08046 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Egr1P08046 Gm6365-201ENSMUST00000054711 744 ntBASIC18.8■□□□□ 0.6
Egr1P08046 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Egr1P08046 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Egr1P08046 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Egr1P08046 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Egr1P08046 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.79■□□□□ 0.6
Egr1P08046 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.79■□□□□ 0.6
Egr1P08046 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Egr1P08046 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Egr1P08046 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Egr1P08046 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Egr1P08046 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Egr1P08046 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Egr1P08046 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Egr1P08046 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Egr1P08046 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Egr1P08046 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Egr1P08046 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Egr1P08046 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Egr1P08046 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Egr1P08046 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.78■□□□□ 0.6
Egr1P08046 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.78■□□□□ 0.6
Egr1P08046 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Egr1P08046 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Egr1P08046 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Egr1P08046 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Egr1P08046 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Egr1P08046 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Egr1P08046 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Egr1P08046 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Egr1P08046 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.76■□□□□ 0.59
Egr1P08046 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Egr1P08046 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Egr1P08046 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Egr1P08046 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Egr1P08046 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Egr1P08046 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Egr1P08046 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.75■□□□□ 0.59
Egr1P08046 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Egr1P08046 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.75■□□□□ 0.59
Egr1P08046 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.75■□□□□ 0.59
Egr1P08046 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.75■□□□□ 0.59
Egr1P08046 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Egr1P08046 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Egr1P08046 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Egr1P08046 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Egr1P08046 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Egr1P08046 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Egr1P08046 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Egr1P08046 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Egr1P08046 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Egr1P08046 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.74■□□□□ 0.59
Egr1P08046 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Egr1P08046 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Egr1P08046 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Egr1P08046 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Egr1P08046 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Egr1P08046 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.73■□□□□ 0.59
Egr1P08046 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Egr1P08046 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.73■□□□□ 0.59
Egr1P08046 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Egr1P08046 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.73■□□□□ 0.59
Egr1P08046 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Egr1P08046 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Egr1P08046 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Egr1P08046 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Egr1P08046 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Egr1P08046 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Egr1P08046 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Egr1P08046 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Egr1P08046 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Egr1P08046 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Egr1P08046 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Egr1P08046 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Egr1P08046 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.72■□□□□ 0.59
Egr1P08046 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Egr1P08046 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Egr1P08046 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Egr1P08046 Gm7290-201ENSMUST00000104990 617 ntBASIC18.71■□□□□ 0.59
Egr1P08046 Gm12918-201ENSMUST00000120234 636 ntBASIC18.71■□□□□ 0.59
Egr1P08046 Gm15710-201ENSMUST00000121821 636 ntBASIC18.71■□□□□ 0.59
Egr1P08046 Gm5075-201ENSMUST00000196916 622 ntBASIC18.71■□□□□ 0.59
Egr1P08046 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.71■□□□□ 0.59
Egr1P08046 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.71■□□□□ 0.59
Egr1P08046 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Egr1P08046 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Egr1P08046 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Egr1P08046 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Egr1P08046 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.7■□□□□ 0.58
Egr1P08046 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Egr1P08046 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Egr1P08046 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Egr1P08046 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Egr1P08046 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.7■□□□□ 0.58
Egr1P08046 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.69■□□□□ 0.58
Egr1P08046 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Egr1P08046 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Egr1P08046 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.68■□□□□ 0.58
Egr1P08046 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms