Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxa4P06798 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.79■□□□□ 0.76
Hoxa4P06798 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxa4P06798 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxa4P06798 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxa4P06798 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxa4P06798 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxa4P06798 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxa4P06798 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxa4P06798 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.78■□□□□ 0.76
Hoxa4P06798 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Hoxa4P06798 Gm6139-201ENSMUST00000079261 882 ntBASIC19.78■□□□□ 0.76
Hoxa4P06798 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Hoxa4P06798 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxa4P06798 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Hoxa4P06798 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Hoxa4P06798 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxa4P06798 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Hoxa4P06798 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxa4P06798 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.77■□□□□ 0.76
Hoxa4P06798 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxa4P06798 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxa4P06798 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxa4P06798 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hoxa4P06798 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxa4P06798 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.76■□□□□ 0.75
Hoxa4P06798 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxa4P06798 Gm12251-201ENSMUST00000117893 792 ntBASIC19.76■□□□□ 0.75
Hoxa4P06798 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxa4P06798 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.76■□□□□ 0.75
Hoxa4P06798 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
Hoxa4P06798 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxa4P06798 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxa4P06798 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxa4P06798 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxa4P06798 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Hoxa4P06798 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.75■□□□□ 0.75
Hoxa4P06798 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.75■□□□□ 0.75
Hoxa4P06798 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxa4P06798 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.75■□□□□ 0.75
Hoxa4P06798 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxa4P06798 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxa4P06798 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxa4P06798 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxa4P06798 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxa4P06798 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.74■□□□□ 0.75
Hoxa4P06798 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxa4P06798 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.74■□□□□ 0.75
Hoxa4P06798 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxa4P06798 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxa4P06798 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.73■□□□□ 0.75
Hoxa4P06798 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.73■□□□□ 0.75
Hoxa4P06798 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.73■□□□□ 0.75
Hoxa4P06798 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Hoxa4P06798 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxa4P06798 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Hoxa4P06798 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxa4P06798 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxa4P06798 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Hoxa4P06798 Gm8493-201ENSMUST00000196881 489 ntBASIC19.73■□□□□ 0.75
Hoxa4P06798 Gm43173-201ENSMUST00000202246 593 ntBASIC19.73■□□□□ 0.75
Hoxa4P06798 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.73■□□□□ 0.75
Hoxa4P06798 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxa4P06798 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Hoxa4P06798 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Hoxa4P06798 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.73■□□□□ 0.75
Hoxa4P06798 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxa4P06798 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Hoxa4P06798 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hoxa4P06798 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxa4P06798 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxa4P06798 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.72■□□□□ 0.75
Hoxa4P06798 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.71■□□□□ 0.75
Hoxa4P06798 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxa4P06798 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxa4P06798 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.71■□□□□ 0.75
Hoxa4P06798 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxa4P06798 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxa4P06798 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.71■□□□□ 0.75
Hoxa4P06798 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxa4P06798 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.71■□□□□ 0.75
Hoxa4P06798 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Hoxa4P06798 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Hoxa4P06798 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.71■□□□□ 0.75
Hoxa4P06798 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hoxa4P06798 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Hoxa4P06798 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxa4P06798 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa4P06798 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa4P06798 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Hoxa4P06798 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa4P06798 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.7■□□□□ 0.74
Hoxa4P06798 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa4P06798 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa4P06798 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa4P06798 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.7■□□□□ 0.74
Hoxa4P06798 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa4P06798 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa4P06798 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa4P06798 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms