Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
P06328 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
P06328 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
P06328 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
P06328 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P06328 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P06328 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
P06328 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P06328 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
P06328 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P06328 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
P06328 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
P06328 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P06328 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.65□□□□□ -0.06
P06328 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
P06328 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
P06328 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P06328 Iqck-206ENSMUST00000208658 2891 ntBASIC14.64□□□□□ -0.07
P06328 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
P06328 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
P06328 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P06328 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
P06328 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.64□□□□□ -0.07
P06328 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
P06328 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P06328 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P06328 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P06328 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P06328 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.64□□□□□ -0.07
P06328 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P06328 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
P06328 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P06328 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P06328 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P06328 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
P06328 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P06328 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
P06328 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P06328 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
P06328 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
P06328 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P06328 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
P06328 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.62□□□□□ -0.07
P06328 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.62□□□□□ -0.07
P06328 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P06328 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P06328 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P06328 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
P06328 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P06328 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
P06328 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P06328 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.61□□□□□ -0.07
P06328 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.61□□□□□ -0.07
P06328 Gm7143-201ENSMUST00000222811 859 ntBASIC14.61□□□□□ -0.07
P06328 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P06328 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P06328 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P06328 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P06328 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P06328 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
P06328 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P06328 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P06328 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
P06328 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.6□□□□□ -0.07
P06328 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
P06328 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P06328 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P06328 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
P06328 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.59□□□□□ -0.07
P06328 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P06328 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.59□□□□□ -0.07
P06328 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.59□□□□□ -0.07
P06328 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P06328 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
P06328 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
P06328 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.59□□□□□ -0.07
P06328 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.59□□□□□ -0.07
P06328 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
P06328 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.59□□□□□ -0.07
P06328 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
P06328 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.59□□□□□ -0.07
P06328 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P06328 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
P06328 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P06328 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
P06328 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
P06328 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P06328 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
P06328 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P06328 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
P06328 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
P06328 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
P06328 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.58□□□□□ -0.08
P06328 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.58□□□□□ -0.08
P06328 Gm40881-201ENSMUST00000223397 166 ntBASIC14.58□□□□□ -0.08
P06328 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
P06328 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P06328 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P06328 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
P06328 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms