Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
P04224 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
P04224 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04224 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.44■□□□□ 0.38
P04224 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
P04224 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
P04224 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.44■□□□□ 0.38
P04224 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04224 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04224 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04224 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P04224 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
P04224 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04224 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04224 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
P04224 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04224 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04224 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04224 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04224 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04224 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04224 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.42■□□□□ 0.38
P04224 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04224 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.42■□□□□ 0.38
P04224 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P04224 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.42■□□□□ 0.38
P04224 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.42■□□□□ 0.38
P04224 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04224 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.42■□□□□ 0.38
P04224 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.42■□□□□ 0.38
P04224 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P04224 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04224 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04224 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04224 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P04224 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04224 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04224 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
P04224 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04224 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
P04224 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.41■□□□□ 0.38
P04224 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P04224 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
P04224 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
P04224 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P04224 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P04224 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04224 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.41■□□□□ 0.38
P04224 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04224 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04224 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04224 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04224 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04224 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04224 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04224 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P04224 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04224 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.4■□□□□ 0.38
P04224 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04224 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04224 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
P04224 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04224 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04224 Gm14523-201ENSMUST00000117260 558 ntBASIC17.4■□□□□ 0.38
P04224 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
P04224 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04224 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04224 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
P04224 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04224 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04224 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04224 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
P04224 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04224 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
P04224 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
P04224 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.4■□□□□ 0.38
P04224 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
P04224 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
P04224 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
P04224 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
P04224 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04224 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04224 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04224 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
P04224 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.39■□□□□ 0.37
P04224 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04224 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04224 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04224 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04224 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04224 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04224 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04224 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04224 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04224 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
P04224 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
P04224 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
P04224 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04224 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04224 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms