Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf17O88472 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Tnfrsf17O88472 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf17O88472 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf17O88472 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf17O88472 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tnfrsf17O88472 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf17O88472 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf17O88472 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf17O88472 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tnfrsf17O88472 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.74■□□□□ 0.59
Tnfrsf17O88472 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.74■□□□□ 0.59
Tnfrsf17O88472 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Tnfrsf17O88472 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf17O88472 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.74■□□□□ 0.59
Tnfrsf17O88472 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf17O88472 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.73■□□□□ 0.59
Tnfrsf17O88472 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Tnfrsf17O88472 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf17O88472 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.73■□□□□ 0.59
Tnfrsf17O88472 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Tnfrsf17O88472 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf17O88472 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf17O88472 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf17O88472 Gm13148-201ENSMUST00000118892 745 ntBASIC18.72■□□□□ 0.59
Tnfrsf17O88472 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.72■□□□□ 0.59
Tnfrsf17O88472 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.72■□□□□ 0.59
Tnfrsf17O88472 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.72■□□□□ 0.59
Tnfrsf17O88472 Gm5408-201ENSMUST00000197998 747 ntBASIC18.72■□□□□ 0.59
Tnfrsf17O88472 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.72■□□□□ 0.59
Tnfrsf17O88472 Gm20049-201ENSMUST00000219950 730 ntBASIC18.72■□□□□ 0.59
Tnfrsf17O88472 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf17O88472 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf17O88472 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf17O88472 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf17O88472 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf17O88472 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf17O88472 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf17O88472 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
Tnfrsf17O88472 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.71■□□□□ 0.59
Tnfrsf17O88472 Gm13836-201ENSMUST00000121159 501 ntBASIC18.71■□□□□ 0.59
Tnfrsf17O88472 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf17O88472 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Tnfrsf17O88472 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf17O88472 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf17O88472 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf17O88472 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf17O88472 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf17O88472 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf17O88472 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf17O88472 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Tnfrsf17O88472 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf17O88472 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf17O88472 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf17O88472 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf17O88472 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.7■□□□□ 0.58
Tnfrsf17O88472 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf17O88472 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf17O88472 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf17O88472 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf17O88472 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf17O88472 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf17O88472 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf17O88472 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf17O88472 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf17O88472 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf17O88472 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Tnfrsf17O88472 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf17O88472 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf17O88472 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf17O88472 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf17O88472 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf17O88472 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Tnfrsf17O88472 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Tnfrsf17O88472 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf17O88472 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf17O88472 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf17O88472 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf17O88472 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf17O88472 Gm37856-201ENSMUST00000191634 999 ntBASIC18.66■□□□□ 0.58
Tnfrsf17O88472 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf17O88472 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf17O88472 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf17O88472 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms