Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Capns1O88456 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Capns1O88456 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Capns1O88456 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.42■□□□□ 0.54
Capns1O88456 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Capns1O88456 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Capns1O88456 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.42■□□□□ 0.54
Capns1O88456 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Capns1O88456 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Capns1O88456 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Capns1O88456 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Capns1O88456 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Capns1O88456 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.41■□□□□ 0.54
Capns1O88456 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Capns1O88456 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Capns1O88456 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Capns1O88456 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Capns1O88456 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Capns1O88456 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Capns1O88456 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Capns1O88456 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Capns1O88456 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.4■□□□□ 0.54
Capns1O88456 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Capns1O88456 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Capns1O88456 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.4■□□□□ 0.54
Capns1O88456 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.4■□□□□ 0.54
Capns1O88456 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Capns1O88456 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Capns1O88456 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Capns1O88456 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Capns1O88456 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.4■□□□□ 0.54
Capns1O88456 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Capns1O88456 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Capns1O88456 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Capns1O88456 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.39■□□□□ 0.53
Capns1O88456 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.39■□□□□ 0.53
Capns1O88456 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.39■□□□□ 0.53
Capns1O88456 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Capns1O88456 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.39■□□□□ 0.53
Capns1O88456 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Capns1O88456 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Capns1O88456 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Capns1O88456 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Capns1O88456 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.38■□□□□ 0.53
Capns1O88456 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Capns1O88456 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Capns1O88456 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Capns1O88456 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Capns1O88456 Etf1-202ENSMUST00000180351 108 ntBASIC18.38■□□□□ 0.53
Capns1O88456 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Capns1O88456 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Capns1O88456 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Capns1O88456 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Capns1O88456 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Capns1O88456 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Capns1O88456 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.37■□□□□ 0.53
Capns1O88456 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Capns1O88456 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Capns1O88456 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.37■□□□□ 0.53
Capns1O88456 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Capns1O88456 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Capns1O88456 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Capns1O88456 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Capns1O88456 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Capns1O88456 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.36■□□□□ 0.53
Capns1O88456 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Capns1O88456 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.36■□□□□ 0.53
Capns1O88456 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Capns1O88456 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Capns1O88456 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Capns1O88456 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Capns1O88456 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Capns1O88456 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Capns1O88456 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Capns1O88456 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Capns1O88456 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Capns1O88456 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Capns1O88456 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Capns1O88456 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.35■□□□□ 0.53
Capns1O88456 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Capns1O88456 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.34■□□□□ 0.53
Capns1O88456 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Capns1O88456 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Capns1O88456 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Capns1O88456 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Capns1O88456 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Capns1O88456 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Capns1O88456 Gm10232-201ENSMUST00000089221 720 ntBASIC18.34■□□□□ 0.53
Capns1O88456 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Capns1O88456 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Capns1O88456 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Capns1O88456 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Capns1O88456 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.34■□□□□ 0.53
Capns1O88456 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.33■□□□□ 0.53
Capns1O88456 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Capns1O88456 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Capns1O88456 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Capns1O88456 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Capns1O88456 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Capns1O88456 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms