Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Limk2O54785 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Limk2O54785 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Limk2O54785 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Limk2O54785 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Limk2O54785 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
Limk2O54785 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Limk2O54785 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.34■□□□□ 0.85
Limk2O54785 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Limk2O54785 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Limk2O54785 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.33■□□□□ 0.85
Limk2O54785 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.33■□□□□ 0.85
Limk2O54785 Gm6139-201ENSMUST00000079261 882 ntBASIC20.33■□□□□ 0.85
Limk2O54785 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Limk2O54785 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Limk2O54785 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.33■□□□□ 0.84
Limk2O54785 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Limk2O54785 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Limk2O54785 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Limk2O54785 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Limk2O54785 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.32■□□□□ 0.84
Limk2O54785 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Limk2O54785 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Limk2O54785 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.32■□□□□ 0.84
Limk2O54785 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Limk2O54785 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Limk2O54785 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Limk2O54785 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Limk2O54785 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Limk2O54785 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Limk2O54785 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Limk2O54785 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Limk2O54785 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Limk2O54785 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Limk2O54785 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.31■□□□□ 0.84
Limk2O54785 Mir6236-201ENSMUST00000184437 123 ntBASIC20.31■□□□□ 0.84
Limk2O54785 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Limk2O54785 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Limk2O54785 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.31■□□□□ 0.84
Limk2O54785 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Limk2O54785 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Limk2O54785 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Limk2O54785 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Limk2O54785 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Limk2O54785 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.3■□□□□ 0.84
Limk2O54785 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.3■□□□□ 0.84
Limk2O54785 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.3■□□□□ 0.84
Limk2O54785 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Limk2O54785 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Limk2O54785 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Limk2O54785 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Limk2O54785 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Limk2O54785 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Limk2O54785 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.29■□□□□ 0.84
Limk2O54785 Gm43137-201ENSMUST00000198052 594 ntBASIC20.29■□□□□ 0.84
Limk2O54785 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Limk2O54785 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.29■□□□□ 0.84
Limk2O54785 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Limk2O54785 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Limk2O54785 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Limk2O54785 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Limk2O54785 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.28■□□□□ 0.84
Limk2O54785 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Limk2O54785 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Limk2O54785 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Limk2O54785 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Limk2O54785 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Limk2O54785 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Limk2O54785 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Limk2O54785 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Limk2O54785 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Limk2O54785 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Limk2O54785 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Limk2O54785 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Limk2O54785 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Limk2O54785 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.27■□□□□ 0.84
Limk2O54785 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
Limk2O54785 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.27■□□□□ 0.84
Limk2O54785 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Limk2O54785 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Limk2O54785 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.27■□□□□ 0.84
Limk2O54785 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Limk2O54785 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Limk2O54785 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Limk2O54785 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Limk2O54785 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Limk2O54785 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Limk2O54785 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Limk2O54785 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
Limk2O54785 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Limk2O54785 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.26■□□□□ 0.83
Limk2O54785 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Limk2O54785 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Limk2O54785 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.26■□□□□ 0.83
Limk2O54785 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Limk2O54785 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Limk2O54785 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.25■□□□□ 0.83
Limk2O54785 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Limk2O54785 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Limk2O54785 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms