Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Matn3O35701 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.13■□□□□ 0.49
Matn3O35701 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Matn3O35701 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Matn3O35701 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Matn3O35701 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Matn3O35701 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Matn3O35701 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Matn3O35701 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Matn3O35701 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.12■□□□□ 0.49
Matn3O35701 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Matn3O35701 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Matn3O35701 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Matn3O35701 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Matn3O35701 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Matn3O35701 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Matn3O35701 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Matn3O35701 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Matn3O35701 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Matn3O35701 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Matn3O35701 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Matn3O35701 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Matn3O35701 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Matn3O35701 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Matn3O35701 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Matn3O35701 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Matn3O35701 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Matn3O35701 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Matn3O35701 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Matn3O35701 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.11■□□□□ 0.49
Matn3O35701 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Matn3O35701 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Matn3O35701 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Matn3O35701 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Matn3O35701 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.1■□□□□ 0.49
Matn3O35701 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Matn3O35701 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Matn3O35701 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Matn3O35701 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Matn3O35701 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Matn3O35701 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Matn3O35701 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Matn3O35701 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Matn3O35701 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Matn3O35701 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Matn3O35701 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Matn3O35701 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Matn3O35701 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Matn3O35701 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Matn3O35701 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Matn3O35701 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Matn3O35701 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Matn3O35701 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.09■□□□□ 0.49
Matn3O35701 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Matn3O35701 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Matn3O35701 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Matn3O35701 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Matn3O35701 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Matn3O35701 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Matn3O35701 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Matn3O35701 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Matn3O35701 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.08■□□□□ 0.49
Matn3O35701 Gm7332-201ENSMUST00000118351 454 ntBASIC18.08■□□□□ 0.48
Matn3O35701 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.08■□□□□ 0.48
Matn3O35701 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Matn3O35701 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Matn3O35701 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Matn3O35701 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Matn3O35701 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Matn3O35701 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Matn3O35701 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Matn3O35701 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Matn3O35701 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Matn3O35701 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Matn3O35701 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Matn3O35701 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Matn3O35701 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Matn3O35701 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Matn3O35701 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Matn3O35701 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Matn3O35701 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Matn3O35701 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Matn3O35701 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Matn3O35701 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Matn3O35701 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.06■□□□□ 0.48
Matn3O35701 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Matn3O35701 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Matn3O35701 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Matn3O35701 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.05■□□□□ 0.48
Matn3O35701 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Matn3O35701 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Matn3O35701 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Matn3O35701 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Matn3O35701 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Matn3O35701 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Matn3O35701 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.05■□□□□ 0.48
Matn3O35701 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Matn3O35701 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Matn3O35701 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Matn3O35701 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms