Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Phox2bO35690 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Phox2bO35690 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Phox2bO35690 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Phox2bO35690 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.08■□□□□ 0.81
Phox2bO35690 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Phox2bO35690 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Phox2bO35690 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Phox2bO35690 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Phox2bO35690 Gm13836-201ENSMUST00000121159 501 ntBASIC20.08■□□□□ 0.81
Phox2bO35690 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Phox2bO35690 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Phox2bO35690 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Phox2bO35690 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Phox2bO35690 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Phox2bO35690 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Phox2bO35690 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.07■□□□□ 0.8
Phox2bO35690 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Phox2bO35690 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.07■□□□□ 0.8
Phox2bO35690 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Phox2bO35690 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Phox2bO35690 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Phox2bO35690 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Phox2bO35690 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Phox2bO35690 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Phox2bO35690 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Phox2bO35690 Gm13168-201ENSMUST00000121771 632 ntBASIC20.06■□□□□ 0.8
Phox2bO35690 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.06■□□□□ 0.8
Phox2bO35690 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.06■□□□□ 0.8
Phox2bO35690 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Phox2bO35690 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Phox2bO35690 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Phox2bO35690 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
Phox2bO35690 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Phox2bO35690 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Phox2bO35690 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Phox2bO35690 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Phox2bO35690 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Phox2bO35690 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.05■□□□□ 0.8
Phox2bO35690 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Phox2bO35690 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Phox2bO35690 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Phox2bO35690 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Phox2bO35690 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Phox2bO35690 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Phox2bO35690 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Phox2bO35690 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Phox2bO35690 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Phox2bO35690 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.03■□□□□ 0.8
Phox2bO35690 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Phox2bO35690 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Phox2bO35690 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Phox2bO35690 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Phox2bO35690 Gm9988-201ENSMUST00000069786 435 ntBASIC20.03■□□□□ 0.8
Phox2bO35690 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Phox2bO35690 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Phox2bO35690 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Phox2bO35690 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Phox2bO35690 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Phox2bO35690 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.02■□□□□ 0.8
Phox2bO35690 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Phox2bO35690 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Phox2bO35690 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.02■□□□□ 0.8
Phox2bO35690 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.02■□□□□ 0.8
Phox2bO35690 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Phox2bO35690 Gm10812-201ENSMUST00000099864 546 ntBASIC20.02■□□□□ 0.8
Phox2bO35690 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Phox2bO35690 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.02■□□□□ 0.8
Phox2bO35690 Notumos-201ENSMUST00000151998 2659 ntBASIC20.02■□□□□ 0.8
Phox2bO35690 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Phox2bO35690 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Phox2bO35690 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Phox2bO35690 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Phox2bO35690 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Phox2bO35690 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.01■□□□□ 0.79
Phox2bO35690 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Phox2bO35690 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.01■□□□□ 0.79
Phox2bO35690 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.01■□□□□ 0.79
Phox2bO35690 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Phox2bO35690 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Phox2bO35690 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Phox2bO35690 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20■□□□□ 0.79
Phox2bO35690 Mir5133-201ENSMUST00000174955 77 ntBASIC20■□□□□ 0.79
Phox2bO35690 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20■□□□□ 0.79
Phox2bO35690 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Phox2bO35690 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Phox2bO35690 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Phox2bO35690 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Phox2bO35690 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Phox2bO35690 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Phox2bO35690 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Phox2bO35690 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.99■□□□□ 0.79
Phox2bO35690 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Phox2bO35690 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Phox2bO35690 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Phox2bO35690 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.99■□□□□ 0.79
Phox2bO35690 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Phox2bO35690 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Phox2bO35690 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Phox2bO35690 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms