Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clcn6O35454 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn6O35454 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn6O35454 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn6O35454 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn6O35454 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn6O35454 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.95■□□□□ 0.94
Clcn6O35454 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn6O35454 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn6O35454 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Clcn6O35454 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.94■□□□□ 0.94
Clcn6O35454 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn6O35454 Gm15820-201ENSMUST00000201566 728 ntBASIC20.94■□□□□ 0.94
Clcn6O35454 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.94■□□□□ 0.94
Clcn6O35454 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn6O35454 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Clcn6O35454 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.94■□□□□ 0.94
Clcn6O35454 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn6O35454 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn6O35454 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn6O35454 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Clcn6O35454 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn6O35454 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn6O35454 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn6O35454 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn6O35454 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn6O35454 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn6O35454 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Clcn6O35454 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn6O35454 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Clcn6O35454 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Clcn6O35454 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Clcn6O35454 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn6O35454 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn6O35454 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn6O35454 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn6O35454 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn6O35454 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn6O35454 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn6O35454 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC20.92■□□□□ 0.94
Clcn6O35454 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.92■□□□□ 0.94
Clcn6O35454 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn6O35454 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn6O35454 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Clcn6O35454 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Clcn6O35454 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn6O35454 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.91■□□□□ 0.94
Clcn6O35454 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.91■□□□□ 0.94
Clcn6O35454 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn6O35454 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Clcn6O35454 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Clcn6O35454 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn6O35454 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn6O35454 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn6O35454 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn6O35454 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn6O35454 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.9■□□□□ 0.94
Clcn6O35454 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn6O35454 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn6O35454 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn6O35454 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.9■□□□□ 0.94
Clcn6O35454 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn6O35454 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn6O35454 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn6O35454 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Clcn6O35454 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn6O35454 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn6O35454 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clcn6O35454 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Clcn6O35454 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn6O35454 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC20.89■□□□□ 0.93
Clcn6O35454 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Clcn6O35454 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn6O35454 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn6O35454 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn6O35454 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn6O35454 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn6O35454 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn6O35454 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn6O35454 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Clcn6O35454 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.88■□□□□ 0.93
Clcn6O35454 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn6O35454 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn6O35454 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn6O35454 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.87■□□□□ 0.93
Clcn6O35454 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Clcn6O35454 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn6O35454 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn6O35454 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.87■□□□□ 0.93
Clcn6O35454 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn6O35454 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn6O35454 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn6O35454 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn6O35454 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn6O35454 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.86■□□□□ 0.93
Clcn6O35454 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn6O35454 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC20.86■□□□□ 0.93
Clcn6O35454 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn6O35454 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn6O35454 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms