Protein–RNA interactions for Protein: O35344

Kpna3, Importin subunit alpha-4, mousemouse

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kpna3O35344 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Kpna3O35344 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Kpna3O35344 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Kpna3O35344 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Kpna3O35344 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.72■□□□□ 0.75
Kpna3O35344 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Kpna3O35344 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Kpna3O35344 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Kpna3O35344 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kpna3O35344 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Kpna3O35344 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kpna3O35344 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kpna3O35344 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kpna3O35344 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Kpna3O35344 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Kpna3O35344 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kpna3O35344 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Kpna3O35344 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Kpna3O35344 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Kpna3O35344 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kpna3O35344 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kpna3O35344 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Kpna3O35344 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kpna3O35344 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kpna3O35344 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.7■□□□□ 0.74
Kpna3O35344 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kpna3O35344 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kpna3O35344 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Kpna3O35344 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kpna3O35344 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kpna3O35344 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Kpna3O35344 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kpna3O35344 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kpna3O35344 Mir6236-201ENSMUST00000184437 123 ntBASIC19.69■□□□□ 0.74
Kpna3O35344 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Kpna3O35344 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.69■□□□□ 0.74
Kpna3O35344 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Kpna3O35344 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Kpna3O35344 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kpna3O35344 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kpna3O35344 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kpna3O35344 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kpna3O35344 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kpna3O35344 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.68■□□□□ 0.74
Kpna3O35344 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.68■□□□□ 0.74
Kpna3O35344 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kpna3O35344 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kpna3O35344 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.68■□□□□ 0.74
Kpna3O35344 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Kpna3O35344 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Kpna3O35344 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kpna3O35344 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kpna3O35344 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.67■□□□□ 0.74
Kpna3O35344 Gm12821-201ENSMUST00000120022 600 ntBASIC19.67■□□□□ 0.74
Kpna3O35344 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Kpna3O35344 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.67■□□□□ 0.74
Kpna3O35344 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Kpna3O35344 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.67■□□□□ 0.74
Kpna3O35344 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Kpna3O35344 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Kpna3O35344 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kpna3O35344 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Kpna3O35344 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Kpna3O35344 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.66■□□□□ 0.74
Kpna3O35344 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.66■□□□□ 0.74
Kpna3O35344 Gm43137-201ENSMUST00000198052 594 ntBASIC19.66■□□□□ 0.74
Kpna3O35344 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Kpna3O35344 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kpna3O35344 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Kpna3O35344 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kpna3O35344 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kpna3O35344 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Kpna3O35344 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kpna3O35344 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kpna3O35344 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kpna3O35344 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kpna3O35344 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Kpna3O35344 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kpna3O35344 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Kpna3O35344 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Kpna3O35344 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kpna3O35344 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kpna3O35344 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Kpna3O35344 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Kpna3O35344 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Kpna3O35344 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Kpna3O35344 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.64■□□□□ 0.73
Kpna3O35344 Gm27454-201ENSMUST00000185090 204 ntBASIC19.64■□□□□ 0.73
Kpna3O35344 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Kpna3O35344 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Kpna3O35344 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Kpna3O35344 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Kpna3O35344 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Kpna3O35344 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Kpna3O35344 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Kpna3O35344 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Kpna3O35344 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Kpna3O35344 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Kpna3O35344 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Kpna3O35344 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms