Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.99□□□□□ -0.33
Pkd1O08852 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pkd1O08852 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pkd1O08852 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pkd1O08852 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pkd1O08852 Gm37856-201ENSMUST00000191634 999 ntBASIC12.98□□□□□ -0.33
Pkd1O08852 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pkd1O08852 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pkd1O08852 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pkd1O08852 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pkd1O08852 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pkd1O08852 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.98□□□□□ -0.33
Pkd1O08852 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.98□□□□□ -0.33
Pkd1O08852 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pkd1O08852 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pkd1O08852 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pkd1O08852 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pkd1O08852 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pkd1O08852 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pkd1O08852 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pkd1O08852 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pkd1O08852 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC12.97□□□□□ -0.33
Pkd1O08852 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.97□□□□□ -0.33
Pkd1O08852 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pkd1O08852 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.97□□□□□ -0.33
Pkd1O08852 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pkd1O08852 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pkd1O08852 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pkd1O08852 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.96□□□□□ -0.33
Pkd1O08852 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pkd1O08852 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pkd1O08852 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pkd1O08852 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pkd1O08852 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pkd1O08852 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pkd1O08852 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pkd1O08852 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pkd1O08852 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC12.95□□□□□ -0.34
Pkd1O08852 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pkd1O08852 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Pkd1O08852 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pkd1O08852 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pkd1O08852 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pkd1O08852 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pkd1O08852 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pkd1O08852 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.95□□□□□ -0.34
Pkd1O08852 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pkd1O08852 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pkd1O08852 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pkd1O08852 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pkd1O08852 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pkd1O08852 Mir6982-201ENSMUST00000184354 68 ntBASIC12.94□□□□□ -0.34
Pkd1O08852 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.94□□□□□ -0.34
Pkd1O08852 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pkd1O08852 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pkd1O08852 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pkd1O08852 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pkd1O08852 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pkd1O08852 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Pkd1O08852 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pkd1O08852 AC153962.1-201ENSMUST00000218530 1948 ntBASIC12.94□□□□□ -0.34
Pkd1O08852 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC12.94□□□□□ -0.34
Pkd1O08852 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pkd1O08852 Gm8520-201ENSMUST00000186517 868 ntBASIC12.94□□□□□ -0.34
Pkd1O08852 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pkd1O08852 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pkd1O08852 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Pkd1O08852 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pkd1O08852 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pkd1O08852 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pkd1O08852 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC12.93□□□□□ -0.34
Pkd1O08852 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pkd1O08852 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pkd1O08852 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pkd1O08852 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pkd1O08852 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Pkd1O08852 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Pkd1O08852 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.92□□□□□ -0.34
Pkd1O08852 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pkd1O08852 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pkd1O08852 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Pkd1O08852 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pkd1O08852 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC12.92□□□□□ -0.34
Pkd1O08852 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.92□□□□□ -0.34
Pkd1O08852 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Pkd1O08852 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.92□□□□□ -0.34
Pkd1O08852 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.92□□□□□ -0.34
Pkd1O08852 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pkd1O08852 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pkd1O08852 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pkd1O08852 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pkd1O08852 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pkd1O08852 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pkd1O08852 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pkd1O08852 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pkd1O08852 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pkd1O08852 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pkd1O08852 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pkd1O08852 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pkd1O08852 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms