Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc188F6WEU2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc188F6WEU2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.67■□□□□ 0.9
Ccdc188F6WEU2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc188F6WEU2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc188F6WEU2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc188F6WEU2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc188F6WEU2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc188F6WEU2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ccdc188F6WEU2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc188F6WEU2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc188F6WEU2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.66■□□□□ 0.9
Ccdc188F6WEU2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc188F6WEU2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc188F6WEU2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc188F6WEU2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc188F6WEU2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc188F6WEU2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc188F6WEU2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc188F6WEU2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc188F6WEU2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc188F6WEU2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc188F6WEU2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc188F6WEU2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Ccdc188F6WEU2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.65■□□□□ 0.9
Ccdc188F6WEU2 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.65■□□□□ 0.9
Ccdc188F6WEU2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.65■□□□□ 0.9
Ccdc188F6WEU2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc188F6WEU2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc188F6WEU2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc188F6WEU2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Ccdc188F6WEU2 Gm715-201ENSMUST00000117865 831 ntBASIC20.64■□□□□ 0.89
Ccdc188F6WEU2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc188F6WEU2 Gm6576-201ENSMUST00000169678 883 ntBASIC20.64■□□□□ 0.89
Ccdc188F6WEU2 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.64■□□□□ 0.89
Ccdc188F6WEU2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc188F6WEU2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc188F6WEU2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc188F6WEU2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc188F6WEU2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc188F6WEU2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.64■□□□□ 0.89
Ccdc188F6WEU2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc188F6WEU2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc188F6WEU2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc188F6WEU2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc188F6WEU2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc188F6WEU2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ccdc188F6WEU2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Ccdc188F6WEU2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ccdc188F6WEU2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc188F6WEU2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc188F6WEU2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc188F6WEU2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc188F6WEU2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccdc188F6WEU2 Gm6211-202ENSMUST00000167849 925 ntBASIC20.62■□□□□ 0.89
Ccdc188F6WEU2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc188F6WEU2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc188F6WEU2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc188F6WEU2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc188F6WEU2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc188F6WEU2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc188F6WEU2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc188F6WEU2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc188F6WEU2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc188F6WEU2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ccdc188F6WEU2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.6■□□□□ 0.89
Ccdc188F6WEU2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ccdc188F6WEU2 Gm27275-201ENSMUST00000184318 272 ntBASIC20.6■□□□□ 0.89
Ccdc188F6WEU2 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.6■□□□□ 0.89
Ccdc188F6WEU2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc188F6WEU2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc188F6WEU2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc188F6WEU2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc188F6WEU2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc188F6WEU2 Gm6420-201ENSMUST00000193885 723 ntBASIC20.59■□□□□ 0.89
Ccdc188F6WEU2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc188F6WEU2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc188F6WEU2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc188F6WEU2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc188F6WEU2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc188F6WEU2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc188F6WEU2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ccdc188F6WEU2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc188F6WEU2 Gm11643-201ENSMUST00000119578 864 ntBASIC20.58■□□□□ 0.89
Ccdc188F6WEU2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc188F6WEU2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.58■□□□□ 0.88
Ccdc188F6WEU2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc188F6WEU2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Ccdc188F6WEU2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.57■□□□□ 0.88
Ccdc188F6WEU2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc188F6WEU2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc188F6WEU2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc188F6WEU2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc188F6WEU2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc188F6WEU2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc188F6WEU2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc188F6WEU2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc188F6WEU2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc188F6WEU2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc188F6WEU2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms