Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.72■■□□□ 1.39
Pcdhb9E9Q5G2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb9E9Q5G2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Pcdhb9E9Q5G2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.71■■□□□ 1.39
Pcdhb9E9Q5G2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb9E9Q5G2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.71■■□□□ 1.39
Pcdhb9E9Q5G2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.71■■□□□ 1.39
Pcdhb9E9Q5G2 Gm43173-201ENSMUST00000202246 593 ntBASIC23.71■■□□□ 1.39
Pcdhb9E9Q5G2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC23.71■■□□□ 1.39
Pcdhb9E9Q5G2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Pcdhb9E9Q5G2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC23.71■■□□□ 1.39
Pcdhb9E9Q5G2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb9E9Q5G2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb9E9Q5G2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb9E9Q5G2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.7■■□□□ 1.38
Pcdhb9E9Q5G2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb9E9Q5G2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.7■■□□□ 1.38
Pcdhb9E9Q5G2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb9E9Q5G2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb9E9Q5G2 Serp2-204ENSMUST00000228055 705 ntBASIC23.7■■□□□ 1.38
Pcdhb9E9Q5G2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb9E9Q5G2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Pcdhb9E9Q5G2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb9E9Q5G2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb9E9Q5G2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb9E9Q5G2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb9E9Q5G2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC23.68■■□□□ 1.38
Pcdhb9E9Q5G2 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.68■■□□□ 1.38
Pcdhb9E9Q5G2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb9E9Q5G2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Pcdhb9E9Q5G2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb9E9Q5G2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb9E9Q5G2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Pcdhb9E9Q5G2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb9E9Q5G2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC23.66■■□□□ 1.38
Pcdhb9E9Q5G2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb9E9Q5G2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Pcdhb9E9Q5G2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb9E9Q5G2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Pcdhb9E9Q5G2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb9E9Q5G2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb9E9Q5G2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb9E9Q5G2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Pcdhb9E9Q5G2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb9E9Q5G2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.65■■□□□ 1.38
Pcdhb9E9Q5G2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb9E9Q5G2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.65■■□□□ 1.38
Pcdhb9E9Q5G2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb9E9Q5G2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb9E9Q5G2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb9E9Q5G2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb9E9Q5G2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb9E9Q5G2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb9E9Q5G2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb9E9Q5G2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.64■■□□□ 1.37
Pcdhb9E9Q5G2 Gm43017-201ENSMUST00000198296 752 ntBASIC23.64■■□□□ 1.37
Pcdhb9E9Q5G2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb9E9Q5G2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb9E9Q5G2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.64■■□□□ 1.37
Pcdhb9E9Q5G2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb9E9Q5G2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb9E9Q5G2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb9E9Q5G2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb9E9Q5G2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb9E9Q5G2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Pcdhb9E9Q5G2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb9E9Q5G2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb9E9Q5G2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb9E9Q5G2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb9E9Q5G2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb9E9Q5G2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC23.62■■□□□ 1.37
Pcdhb9E9Q5G2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.62■■□□□ 1.37
Pcdhb9E9Q5G2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb9E9Q5G2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb9E9Q5G2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb9E9Q5G2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb9E9Q5G2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb9E9Q5G2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC23.62■■□□□ 1.37
Pcdhb9E9Q5G2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb9E9Q5G2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.61■■□□□ 1.37
Pcdhb9E9Q5G2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb9E9Q5G2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.61■■□□□ 1.37
Pcdhb9E9Q5G2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Pcdhb9E9Q5G2 Gm2011-201ENSMUST00000203124 1263 ntBASIC23.61■■□□□ 1.37
Pcdhb9E9Q5G2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb9E9Q5G2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.61■■□□□ 1.37
Pcdhb9E9Q5G2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
Pcdhb9E9Q5G2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Pcdhb9E9Q5G2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb9E9Q5G2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb9E9Q5G2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb9E9Q5G2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb9E9Q5G2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb9E9Q5G2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb9E9Q5G2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.6■■□□□ 1.37
Pcdhb9E9Q5G2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC23.6■■□□□ 1.37
Pcdhb9E9Q5G2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.6■■□□□ 1.37
Pcdhb9E9Q5G2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.6■■□□□ 1.37
Pcdhb9E9Q5G2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.6■■□□□ 1.37
Pcdhb9E9Q5G2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.6■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms