Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sptbn4E9PX29 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.38■□□□□ 0.53
Sptbn4E9PX29 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sptbn4E9PX29 Gm6576-201ENSMUST00000169678 883 ntBASIC18.38■□□□□ 0.53
Sptbn4E9PX29 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sptbn4E9PX29 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sptbn4E9PX29 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sptbn4E9PX29 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.37■□□□□ 0.53
Sptbn4E9PX29 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sptbn4E9PX29 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sptbn4E9PX29 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sptbn4E9PX29 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sptbn4E9PX29 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.37■□□□□ 0.53
Sptbn4E9PX29 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.37■□□□□ 0.53
Sptbn4E9PX29 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.37■□□□□ 0.53
Sptbn4E9PX29 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sptbn4E9PX29 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sptbn4E9PX29 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.36■□□□□ 0.53
Sptbn4E9PX29 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Sptbn4E9PX29 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sptbn4E9PX29 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sptbn4E9PX29 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.36■□□□□ 0.53
Sptbn4E9PX29 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sptbn4E9PX29 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sptbn4E9PX29 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sptbn4E9PX29 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sptbn4E9PX29 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.35■□□□□ 0.53
Sptbn4E9PX29 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sptbn4E9PX29 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.35■□□□□ 0.53
Sptbn4E9PX29 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.35■□□□□ 0.53
Sptbn4E9PX29 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sptbn4E9PX29 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sptbn4E9PX29 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sptbn4E9PX29 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sptbn4E9PX29 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
Sptbn4E9PX29 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sptbn4E9PX29 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.34■□□□□ 0.53
Sptbn4E9PX29 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sptbn4E9PX29 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Sptbn4E9PX29 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.33■□□□□ 0.52
Sptbn4E9PX29 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.33■□□□□ 0.52
Sptbn4E9PX29 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sptbn4E9PX29 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sptbn4E9PX29 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sptbn4E9PX29 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sptbn4E9PX29 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.33■□□□□ 0.52
Sptbn4E9PX29 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Sptbn4E9PX29 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sptbn4E9PX29 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sptbn4E9PX29 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sptbn4E9PX29 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Sptbn4E9PX29 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sptbn4E9PX29 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sptbn4E9PX29 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Sptbn4E9PX29 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.32■□□□□ 0.52
Sptbn4E9PX29 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sptbn4E9PX29 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sptbn4E9PX29 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptbn4E9PX29 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.31■□□□□ 0.52
Sptbn4E9PX29 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Sptbn4E9PX29 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Sptbn4E9PX29 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sptbn4E9PX29 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.31■□□□□ 0.52
Sptbn4E9PX29 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sptbn4E9PX29 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Sptbn4E9PX29 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptbn4E9PX29 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sptbn4E9PX29 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptbn4E9PX29 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptbn4E9PX29 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptbn4E9PX29 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sptbn4E9PX29 Gm5643-201ENSMUST00000117081 966 ntBASIC18.3■□□□□ 0.52
Sptbn4E9PX29 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sptbn4E9PX29 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sptbn4E9PX29 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sptbn4E9PX29 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sptbn4E9PX29 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sptbn4E9PX29 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sptbn4E9PX29 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sptbn4E9PX29 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sptbn4E9PX29 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn4E9PX29 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn4E9PX29 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn4E9PX29 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn4E9PX29 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.29■□□□□ 0.52
Sptbn4E9PX29 Gm27741-201ENSMUST00000185060 237 ntBASIC18.29■□□□□ 0.52
Sptbn4E9PX29 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn4E9PX29 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn4E9PX29 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.29■□□□□ 0.52
Sptbn4E9PX29 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sptbn4E9PX29 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sptbn4E9PX29 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.29■□□□□ 0.52
Sptbn4E9PX29 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptbn4E9PX29 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn4E9PX29 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn4E9PX29 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn4E9PX29 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sptbn4E9PX29 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptbn4E9PX29 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Sptbn4E9PX29 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms