Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col4a6B1AVK5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col4a6B1AVK5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col4a6B1AVK5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Col4a6B1AVK5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col4a6B1AVK5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Col4a6B1AVK5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.08■□□□□ 0.96
Col4a6B1AVK5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col4a6B1AVK5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.08■□□□□ 0.96
Col4a6B1AVK5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col4a6B1AVK5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a6B1AVK5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a6B1AVK5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a6B1AVK5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a6B1AVK5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.07■□□□□ 0.96
Col4a6B1AVK5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a6B1AVK5 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a6B1AVK5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a6B1AVK5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a6B1AVK5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a6B1AVK5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a6B1AVK5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Col4a6B1AVK5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a6B1AVK5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Col4a6B1AVK5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col4a6B1AVK5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col4a6B1AVK5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.05■□□□□ 0.96
Col4a6B1AVK5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col4a6B1AVK5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.05■□□□□ 0.96
Col4a6B1AVK5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Col4a6B1AVK5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col4a6B1AVK5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.05■□□□□ 0.96
Col4a6B1AVK5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col4a6B1AVK5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a6B1AVK5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a6B1AVK5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Col4a6B1AVK5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a6B1AVK5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Col4a6B1AVK5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a6B1AVK5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a6B1AVK5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a6B1AVK5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Col4a6B1AVK5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.03■□□□□ 0.96
Col4a6B1AVK5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a6B1AVK5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Col4a6B1AVK5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a6B1AVK5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a6B1AVK5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Col4a6B1AVK5 Gm10602-201ENSMUST00000098239 609 ntBASIC21.02■□□□□ 0.95
Col4a6B1AVK5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a6B1AVK5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a6B1AVK5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Col4a6B1AVK5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a6B1AVK5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.01■□□□□ 0.95
Col4a6B1AVK5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a6B1AVK5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a6B1AVK5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a6B1AVK5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col4a6B1AVK5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a6B1AVK5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21■□□□□ 0.95
Col4a6B1AVK5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21■□□□□ 0.95
Col4a6B1AVK5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a6B1AVK5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a6B1AVK5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a6B1AVK5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a6B1AVK5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.99■□□□□ 0.95
Col4a6B1AVK5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a6B1AVK5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a6B1AVK5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.99■□□□□ 0.95
Col4a6B1AVK5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a6B1AVK5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a6B1AVK5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.99■□□□□ 0.95
Col4a6B1AVK5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a6B1AVK5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a6B1AVK5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a6B1AVK5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a6B1AVK5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a6B1AVK5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.98■□□□□ 0.95
Col4a6B1AVK5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a6B1AVK5 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.98■□□□□ 0.95
Col4a6B1AVK5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a6B1AVK5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a6B1AVK5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a6B1AVK5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a6B1AVK5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a6B1AVK5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a6B1AVK5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a6B1AVK5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Col4a6B1AVK5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a6B1AVK5 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.96■□□□□ 0.95
Col4a6B1AVK5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.96■□□□□ 0.95
Col4a6B1AVK5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.95■□□□□ 0.94
Col4a6B1AVK5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a6B1AVK5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Col4a6B1AVK5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.95■□□□□ 0.94
Col4a6B1AVK5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a6B1AVK5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Col4a6B1AVK5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Col4a6B1AVK5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.94■□□□□ 0.94
Col4a6B1AVK5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms