Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.42■■□□□ 1.18
Krt28A6BLY7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Krt28A6BLY7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Krt28A6BLY7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
Krt28A6BLY7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Krt28A6BLY7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Krt28A6BLY7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.41■■□□□ 1.18
Krt28A6BLY7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Krt28A6BLY7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Krt28A6BLY7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Krt28A6BLY7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.41■■□□□ 1.18
Krt28A6BLY7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Krt28A6BLY7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Krt28A6BLY7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
Krt28A6BLY7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Krt28A6BLY7 Mir6236-201ENSMUST00000184437 123 ntBASIC22.4■■□□□ 1.18
Krt28A6BLY7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Krt28A6BLY7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Krt28A6BLY7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Krt28A6BLY7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Krt28A6BLY7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Krt28A6BLY7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Krt28A6BLY7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Krt28A6BLY7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Krt28A6BLY7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Krt28A6BLY7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Krt28A6BLY7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Krt28A6BLY7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Krt28A6BLY7 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.38■■□□□ 1.17
Krt28A6BLY7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Krt28A6BLY7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Krt28A6BLY7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Krt28A6BLY7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Krt28A6BLY7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC22.38■■□□□ 1.17
Krt28A6BLY7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC22.38■■□□□ 1.17
Krt28A6BLY7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Krt28A6BLY7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Krt28A6BLY7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Krt28A6BLY7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Krt28A6BLY7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.37■■□□□ 1.17
Krt28A6BLY7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Krt28A6BLY7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Krt28A6BLY7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Krt28A6BLY7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Krt28A6BLY7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Krt28A6BLY7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Krt28A6BLY7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Krt28A6BLY7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC22.36■■□□□ 1.17
Krt28A6BLY7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Krt28A6BLY7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Krt28A6BLY7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Krt28A6BLY7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Krt28A6BLY7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Krt28A6BLY7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Krt28A6BLY7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.35■■□□□ 1.17
Krt28A6BLY7 Gm12527-201ENSMUST00000117967 564 ntBASIC22.35■■□□□ 1.17
Krt28A6BLY7 Gm22325-201ENSMUST00000158904 308 ntBASIC22.35■■□□□ 1.17
Krt28A6BLY7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Krt28A6BLY7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Krt28A6BLY7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Krt28A6BLY7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Krt28A6BLY7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Krt28A6BLY7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.35■■□□□ 1.17
Krt28A6BLY7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Krt28A6BLY7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Krt28A6BLY7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Krt28A6BLY7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Krt28A6BLY7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Krt28A6BLY7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
Krt28A6BLY7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Krt28A6BLY7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.33■■□□□ 1.17
Krt28A6BLY7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Krt28A6BLY7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Krt28A6BLY7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Krt28A6BLY7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Krt28A6BLY7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Krt28A6BLY7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.33■■□□□ 1.17
Krt28A6BLY7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Krt28A6BLY7 Gm10571-201ENSMUST00000097869 1638 ntBASIC22.31■■□□□ 1.16
Krt28A6BLY7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Krt28A6BLY7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Krt28A6BLY7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Krt28A6BLY7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Krt28A6BLY7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Krt28A6BLY7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Krt28A6BLY7 Mir7071-201ENSMUST00000184847 69 ntBASIC22.3■■□□□ 1.16
Krt28A6BLY7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Krt28A6BLY7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Krt28A6BLY7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Krt28A6BLY7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Krt28A6BLY7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Krt28A6BLY7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC22.29■■□□□ 1.16
Krt28A6BLY7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.29■■□□□ 1.16
Krt28A6BLY7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Krt28A6BLY7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Krt28A6BLY7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Krt28A6BLY7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Krt28A6BLY7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Krt28A6BLY7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Krt28A6BLY7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms