Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ubr4A2AN08 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ubr4A2AN08 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Ubr4A2AN08 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ubr4A2AN08 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ubr4A2AN08 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ubr4A2AN08 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ubr4A2AN08 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC10.85□□□□□ -0.67
Ubr4A2AN08 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ubr4A2AN08 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC10.85□□□□□ -0.67
Ubr4A2AN08 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ubr4A2AN08 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ubr4A2AN08 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ubr4A2AN08 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ubr4A2AN08 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ubr4A2AN08 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ubr4A2AN08 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ubr4A2AN08 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ubr4A2AN08 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ubr4A2AN08 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Ubr4A2AN08 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ubr4A2AN08 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ubr4A2AN08 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ubr4A2AN08 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC10.84□□□□□ -0.67
Ubr4A2AN08 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ubr4A2AN08 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ubr4A2AN08 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ubr4A2AN08 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ubr4A2AN08 Gm6659-201ENSMUST00000174752 547 ntBASIC10.84□□□□□ -0.67
Ubr4A2AN08 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ubr4A2AN08 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC10.84□□□□□ -0.67
Ubr4A2AN08 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC10.84□□□□□ -0.67
Ubr4A2AN08 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ubr4A2AN08 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ubr4A2AN08 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ubr4A2AN08 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ubr4A2AN08 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ubr4A2AN08 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ubr4A2AN08 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ubr4A2AN08 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ubr4A2AN08 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ubr4A2AN08 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC10.82□□□□□ -0.68
Ubr4A2AN08 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ubr4A2AN08 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ubr4A2AN08 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10.82□□□□□ -0.68
Ubr4A2AN08 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ubr4A2AN08 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ubr4A2AN08 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC10.82□□□□□ -0.68
Ubr4A2AN08 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC10.82□□□□□ -0.68
Ubr4A2AN08 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ubr4A2AN08 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ubr4A2AN08 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ubr4A2AN08 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ubr4A2AN08 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ubr4A2AN08 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ubr4A2AN08 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ubr4A2AN08 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC10.81□□□□□ -0.68
Ubr4A2AN08 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ubr4A2AN08 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ubr4A2AN08 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC10.81□□□□□ -0.68
Ubr4A2AN08 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ubr4A2AN08 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ubr4A2AN08 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ubr4A2AN08 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ubr4A2AN08 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ubr4A2AN08 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ubr4A2AN08 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ubr4A2AN08 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.81□□□□□ -0.68
Ubr4A2AN08 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Gm9103-201ENSMUST00000119371 405 ntBASIC10.8□□□□□ -0.68
Ubr4A2AN08 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr4A2AN08 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC10.8□□□□□ -0.68
Ubr4A2AN08 Gm43530-201ENSMUST00000195920 274 ntBASIC10.8□□□□□ -0.68
Ubr4A2AN08 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr4A2AN08 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ubr4A2AN08 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
Ubr4A2AN08 Gm6211-202ENSMUST00000167849 925 ntBASIC10.79□□□□□ -0.68
Ubr4A2AN08 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Ubr4A2AN08 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr4A2AN08 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr4A2AN08 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Ubr4A2AN08 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr4A2AN08 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr4A2AN08 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ubr4A2AN08 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms