Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
Shroom2A2ALU4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Shroom2A2ALU4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC32.49■■■□□ 2.79
Shroom2A2ALU4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Shroom2A2ALU4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC32.49■■■□□ 2.79
Shroom2A2ALU4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Shroom2A2ALU4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Shroom2A2ALU4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Shroom2A2ALU4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Shroom2A2ALU4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC32.48■■■□□ 2.79
Shroom2A2ALU4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Shroom2A2ALU4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Shroom2A2ALU4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Shroom2A2ALU4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC32.47■■■□□ 2.79
Shroom2A2ALU4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Shroom2A2ALU4 Gm15565-201ENSMUST00000118890 427 ntBASIC32.47■■■□□ 2.79
Shroom2A2ALU4 Gm26524-201ENSMUST00000192339 390 ntBASIC32.47■■■□□ 2.79
Shroom2A2ALU4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
Shroom2A2ALU4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Shroom2A2ALU4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Shroom2A2ALU4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
Shroom2A2ALU4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC32.46■■■□□ 2.79
Shroom2A2ALU4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC32.46■■■□□ 2.79
Shroom2A2ALU4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC32.46■■■□□ 2.79
Shroom2A2ALU4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Shroom2A2ALU4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Shroom2A2ALU4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Shroom2A2ALU4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC32.45■■■□□ 2.79
Shroom2A2ALU4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC32.45■■■□□ 2.79
Shroom2A2ALU4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC32.45■■■□□ 2.78
Shroom2A2ALU4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC32.45■■■□□ 2.78
Shroom2A2ALU4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Shroom2A2ALU4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC32.44■■■□□ 2.78
Shroom2A2ALU4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Shroom2A2ALU4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
Shroom2A2ALU4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
Shroom2A2ALU4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
Shroom2A2ALU4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Shroom2A2ALU4 Gm10819-201ENSMUST00000099988 561 ntBASIC32.43■■■□□ 2.78
Shroom2A2ALU4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
Shroom2A2ALU4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC32.42■■■□□ 2.78
Shroom2A2ALU4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC32.42■■■□□ 2.78
Shroom2A2ALU4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
Shroom2A2ALU4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Shroom2A2ALU4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC32.42■■■□□ 2.78
Shroom2A2ALU4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Shroom2A2ALU4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Shroom2A2ALU4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Shroom2A2ALU4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC32.41■■■□□ 2.78
Shroom2A2ALU4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Shroom2A2ALU4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC32.4■■■□□ 2.78
Shroom2A2ALU4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
Shroom2A2ALU4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Shroom2A2ALU4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Shroom2A2ALU4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Shroom2A2ALU4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Shroom2A2ALU4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
Shroom2A2ALU4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Shroom2A2ALU4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Shroom2A2ALU4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Shroom2A2ALU4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC32.39■■■□□ 2.78
Shroom2A2ALU4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC32.39■■■□□ 2.77
Shroom2A2ALU4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.77
Shroom2A2ALU4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC32.38■■■□□ 2.77
Shroom2A2ALU4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Shroom2A2ALU4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Shroom2A2ALU4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
Shroom2A2ALU4 AC121577.1-201ENSMUST00000227302 707 ntBASIC32.38■■■□□ 2.77
Shroom2A2ALU4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Shroom2A2ALU4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Shroom2A2ALU4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Shroom2A2ALU4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Shroom2A2ALU4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Shroom2A2ALU4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC32.38■■■□□ 2.77
Shroom2A2ALU4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
Shroom2A2ALU4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Shroom2A2ALU4 Gm13146-201ENSMUST00000118508 780 ntBASIC32.37■■■□□ 2.77
Shroom2A2ALU4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC32.37■■■□□ 2.77
Shroom2A2ALU4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Shroom2A2ALU4 Gm6365-201ENSMUST00000054711 744 ntBASIC32.37■■■□□ 2.77
Shroom2A2ALU4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Shroom2A2ALU4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
Shroom2A2ALU4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Shroom2A2ALU4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Shroom2A2ALU4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Shroom2A2ALU4 Arhgef33-211ENSMUST00000225658 473 ntBASIC32.35■■■□□ 2.77
Shroom2A2ALU4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Shroom2A2ALU4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC32.35■■■□□ 2.77
Shroom2A2ALU4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
Shroom2A2ALU4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Shroom2A2ALU4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Shroom2A2ALU4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Shroom2A2ALU4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Shroom2A2ALU4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC32.33■■■□□ 2.77
Shroom2A2ALU4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Shroom2A2ALU4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC32.33■■■□□ 2.77
Shroom2A2ALU4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC32.33■■■□□ 2.77
Shroom2A2ALU4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC32.33■■■□□ 2.77
Shroom2A2ALU4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Shroom2A2ALU4 AL672049.1-201ENSMUST00000197943 91 ntBASIC32.32■■■□□ 2.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms