Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.64■□□□□ 0.25
Trbv29A0A0G2LB96 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv29A0A0G2LB96 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv29A0A0G2LB96 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv29A0A0G2LB96 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv29A0A0G2LB96 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv29A0A0G2LB96 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv29A0A0G2LB96 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv29A0A0G2LB96 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv29A0A0G2LB96 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.63■□□□□ 0.25
Trbv29A0A0G2LB96 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbv29A0A0G2LB96 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv29A0A0G2LB96 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv29A0A0G2LB96 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv29A0A0G2LB96 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv29A0A0G2LB96 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv29A0A0G2LB96 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv29A0A0G2LB96 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.61■□□□□ 0.25
Trbv29A0A0G2LB96 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trbv29A0A0G2LB96 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trbv29A0A0G2LB96 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv29A0A0G2LB96 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.61■□□□□ 0.25
Trbv29A0A0G2LB96 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv29A0A0G2LB96 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv29A0A0G2LB96 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv29A0A0G2LB96 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv29A0A0G2LB96 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv29A0A0G2LB96 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trbv29A0A0G2LB96 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv29A0A0G2LB96 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv29A0A0G2LB96 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv29A0A0G2LB96 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv29A0A0G2LB96 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv29A0A0G2LB96 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.6■□□□□ 0.25
Trbv29A0A0G2LB96 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv29A0A0G2LB96 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv29A0A0G2LB96 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv29A0A0G2LB96 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv29A0A0G2LB96 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.59■□□□□ 0.25
Trbv29A0A0G2LB96 Gm43566-201ENSMUST00000196851 808 ntBASIC16.59■□□□□ 0.25
Trbv29A0A0G2LB96 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv29A0A0G2LB96 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv29A0A0G2LB96 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv29A0A0G2LB96 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv29A0A0G2LB96 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Trbv29A0A0G2LB96 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Trbv29A0A0G2LB96 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv29A0A0G2LB96 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv29A0A0G2LB96 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv29A0A0G2LB96 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv29A0A0G2LB96 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trbv29A0A0G2LB96 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv29A0A0G2LB96 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trbv29A0A0G2LB96 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv29A0A0G2LB96 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv29A0A0G2LB96 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv29A0A0G2LB96 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv29A0A0G2LB96 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv29A0A0G2LB96 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbv29A0A0G2LB96 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbv29A0A0G2LB96 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbv29A0A0G2LB96 Gm13238-201ENSMUST00000117655 780 ntBASIC16.57■□□□□ 0.24
Trbv29A0A0G2LB96 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.57■□□□□ 0.24
Trbv29A0A0G2LB96 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trbv29A0A0G2LB96 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv29A0A0G2LB96 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv29A0A0G2LB96 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv29A0A0G2LB96 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv29A0A0G2LB96 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trbv29A0A0G2LB96 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv29A0A0G2LB96 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv29A0A0G2LB96 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv29A0A0G2LB96 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.56■□□□□ 0.24
Trbv29A0A0G2LB96 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trbv29A0A0G2LB96 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv29A0A0G2LB96 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv29A0A0G2LB96 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv29A0A0G2LB96 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv29A0A0G2LB96 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv29A0A0G2LB96 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trbv29A0A0G2LB96 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv29A0A0G2LB96 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbv29A0A0G2LB96 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv29A0A0G2LB96 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms