Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC12.55□□□□□ -0.4
Igkv8-27A0A0G2JF28 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv8-27A0A0G2JF28 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Igkv8-27A0A0G2JF28 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv8-27A0A0G2JF28 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC12.55□□□□□ -0.4
Igkv8-27A0A0G2JF28 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Igkv8-27A0A0G2JF28 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-27A0A0G2JF28 Rarb-207ENSMUST00000225921 2756 ntBASIC12.52□□□□□ -0.4
Igkv8-27A0A0G2JF28 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv8-27A0A0G2JF28 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv8-27A0A0G2JF28 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Igkv8-27A0A0G2JF28 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Igkv8-27A0A0G2JF28 Gm43182-201ENSMUST00000199476 2528 ntBASIC12.52□□□□□ -0.4
Igkv8-27A0A0G2JF28 Fam105a-203ENSMUST00000226170 3043 ntBASIC12.52□□□□□ -0.4
Igkv8-27A0A0G2JF28 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Igkv8-27A0A0G2JF28 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv8-27A0A0G2JF28 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Igkv8-27A0A0G2JF28 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Igkv8-27A0A0G2JF28 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv8-27A0A0G2JF28 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv8-27A0A0G2JF28 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv8-27A0A0G2JF28 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv8-27A0A0G2JF28 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Igkv8-27A0A0G2JF28 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv8-27A0A0G2JF28 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv8-27A0A0G2JF28 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Igkv8-27A0A0G2JF28 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
Igkv8-27A0A0G2JF28 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Igkv8-27A0A0G2JF28 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Igkv8-27A0A0G2JF28 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-27A0A0G2JF28 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-27A0A0G2JF28 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Igkv8-27A0A0G2JF28 Gm45364-201ENSMUST00000210883 159 ntBASIC12.51□□□□□ -0.41
Igkv8-27A0A0G2JF28 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-27A0A0G2JF28 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
Igkv8-27A0A0G2JF28 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-27A0A0G2JF28 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Igkv8-27A0A0G2JF28 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-27A0A0G2JF28 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Igkv8-27A0A0G2JF28 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC12.51□□□□□ -0.41
Igkv8-27A0A0G2JF28 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-27A0A0G2JF28 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-27A0A0G2JF28 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-27A0A0G2JF28 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-27A0A0G2JF28 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC12.5□□□□□ -0.41
Igkv8-27A0A0G2JF28 AC154454.1-201ENSMUST00000225253 216 ntBASIC12.5□□□□□ -0.41
Igkv8-27A0A0G2JF28 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-27A0A0G2JF28 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-27A0A0G2JF28 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-27A0A0G2JF28 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-27A0A0G2JF28 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-27A0A0G2JF28 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.5□□□□□ -0.41
Igkv8-27A0A0G2JF28 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Igkv8-27A0A0G2JF28 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-27A0A0G2JF28 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Igkv8-27A0A0G2JF28 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-27A0A0G2JF28 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-27A0A0G2JF28 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-27A0A0G2JF28 Gm43231-201ENSMUST00000202960 2258 ntBASIC12.49□□□□□ -0.41
Igkv8-27A0A0G2JF28 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-27A0A0G2JF28 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-27A0A0G2JF28 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-27A0A0G2JF28 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Igkv8-27A0A0G2JF28 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Igkv8-27A0A0G2JF28 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms